RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 RPS27LQ71UM5 84 aaKnown RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 H1FNTQ75WM6 255 aaPredicted RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 VMO1Q7Z5L0 202 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 NET1Q7Z628 596 aaPredicted RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 ATG16L2Q8NAA4 619 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 OR5AU1Q8NGC0 362 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 SFXN5Q8TD22 340 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 OR5P2Q8WZ92 322 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 RPL36ALQ969Q0 106 aaKnown RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 MAELQ96JY0 434 aaKnown RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 EGLN2Q96KS0 407 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 OR2V2Q96R30 315 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 ALG8Q9BVK2 526 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 MMADHCQ9H3L0 296 aaPredicted RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 TRIM36Q9NQ86 728 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 ATAD3AQ9NVI7 634 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 ETAA1Q9NY74 926 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.71□□□□□ -1.66
NCL-208ENST00000466274 ZNF225Q9UK10 706 aa4.71□□□□□ -1.66
NCL-208ENST00000466274 TCRBV9S1A1TA0A576 114 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 ELOVL7A1L3X0 281 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 C5orf49A4QMS7 147 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 E7ESA3 106 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 H3BUI4 141 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 SLC28A1O00337 649 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 AP3D1O14617 1153 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 BCAS1O75363 584 aaPredicted RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 SEC22BO75396 215 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 CRCPO75575 148 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 NQO1P15559 274 aaKnown RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 NCF2P19878 526 aaPredicted RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 TAC1P20366 129 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 ARRB2P32121 409 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 HPCAL1P37235 193 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 ANP32AP39687 249 aaKnown RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 PSMB10P40306 273 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 VDAC2P45880 294 aaPredicted RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 CSNK1A1P48729 337 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 HTR6P50406 440 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 PPP1CBP62140 327 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 EPS8Q12929 822 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 BNIP2Q12982 314 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 LRRC75BQ2VPJ9 315 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 PLAC9Q5JTB6 97 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 CEP78Q5JTW2 689 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 NCR3LG1Q68D85 454 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 C5orf46Q6UWT4 87 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 CCDC121Q6ZUS5 278 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 CENPVQ7Z7K6 275 aaPredicted RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 SBSPONQ8IVN8 264 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 CADM2Q8N3J6 435 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 OR4X2Q8NGF9 303 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 OR5D16Q8NGK9 328 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 OR11L1Q8NGX0 322 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 PSMA8Q8TAA3 256 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 ZNF583Q96ND8 569 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 PRR25Q96S07 402 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 OSBPL9Q96SU4 736 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 CCT7Q99832 543 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 SH3GL3Q99963 347 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 MRPL57Q9BQC6 102 aaKnown RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 CDCA4Q9BXL8 241 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 SEMA6AQ9H2E6 1030 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 MRPL46Q9H2W6 279 aaKnown RBP4.7□□□□□ -1.66
NCL-208ENST00000466274 RMND5AQ9H871 391 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 ZNF702PQ9H963 129 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 CCNB1IP1Q9NPC3 277 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 NRIP3Q9NQ35 241 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 ONECUT1Q9UBC0 465 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 JRKLQ9Y4A0 524 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 DNAH7Q8WXX0 4024 aa4.7□□□□□ -1.66
NCL-208ENST00000466274 ARHGAP32A7KAX9 2087 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 DOCK11Q5JSL3 2073 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 A0A1B0GW55 424 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 PRSS29PA6NIE9 313 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 ZNF785A8K8V0 405 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 FTCDNL1E5RQL4 147 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 H3BQF6 201 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 PGRMC1O00264 195 aaKnown RBP4.69□□□□□ -1.66
NCL-208ENST00000466274 CFLARO15519 480 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 NPIPB7O75200 414 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 DUX4L2P0CJ85 424 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 DUX4L3P0CJ86 424 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 DUX4L5P0CJ88 424 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 DUX4L6P0CJ89 424 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 DUX4L7P0CJ90 424 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 IL7RP16871 459 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 NDUFB7P17568 137 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 EFNA1P20827 205 aaPredicted RBP4.69□□□□□ -1.66
NCL-208ENST00000466274 MALP21145 153 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 SSTR1P30872 391 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 SAA4P35542 130 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 RPS5P46782 204 aaKnown RBP4.69□□□□□ -1.66
NCL-208ENST00000466274 SERPINB8P50452 374 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 UBE2E1P51965 193 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 PSG7Q13046 419 aa4.69□□□□□ -1.66
NCL-208ENST00000466274 CNN3Q15417 329 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms