RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SIAH3Q8IW03 269 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 SULF2Q8IWU5 870 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 TMEM123Q8N131 208 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 TMEM54Q969K7 222 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 S100A16Q96FQ6 103 aaKnown RBP16.17■□□□□ 0.18
COL9A3-205ENST00000466192 ADGRG7Q96K78 797 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 NKX3-1Q99801 234 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-205ENST00000466192 NUFIP1Q9UHK0 495 aaKnown RBP16.17■□□□□ 0.18
COL9A3-205ENST00000466192 GDF2Q9UK05 429 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-205ENST00000466192 ZNF221Q9UK13 617 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 POLR1DQ9Y2S0 133 aa16.17■□□□□ 0.18
COL9A3-205ENST00000466192 HMX3A6NHT5 357 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 CD2P06729 351 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 CD82P27701 267 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 BTCP35070 178 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ART1P52961 327 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ATAD3CQ5T2N8 411 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 PLPP7Q8NBV4 271 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 OR6N1Q8NGY5 312 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 SMIM4Q8WVI0 70 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 NEK6Q9HC98 313 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 STEAP1Q9UHE8 339 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ZNF407Q9C0G0 2248 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 CTDSPLO15194 276 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 TPD52L2O43399 206 aaKnown RBP16.16■□□□□ 0.18
COL9A3-205ENST00000466192 CXCL13O43927 109 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 SELENOPP49908 381 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 PLA2G7Q13093 441 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 KCNMB1Q16558 191 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ST6GAL2Q96JF0 529 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ZNF703Q9H7S9 590 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ASCL3Q9NQ33 180 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ASH2LQ9UBL3 628 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 HHLA2Q9UM44 414 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 FOXJ3Q9UPW0 622 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ETV7Q9Y603 341 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 ALG5Q9Y673 324 aa16.16■□□□□ 0.18
COL9A3-205ENST00000466192 DNAJC13O75165 2243 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 ZFHX4Q86UP3 3567 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 LOC107986453A0A1B0GWG9 222 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 GSTZ1O43708 216 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-205ENST00000466192 ITGA5P08648 1049 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 TMIGD3P0DMS9 266 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-205ENST00000466192 POU3F2P20265 443 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-205ENST00000466192 CDK2P24941 298 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 PLA1AQ53H76 456 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 TMEM69Q5SWH9 247 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 OR13C3Q8NGS6 347 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 OR10D3Q8NH80 312 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 OR2V1Q8NHB1 315 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 RAB40AQ8WXH6 277 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 ZNF775Q96BV0 537 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-205ENST00000466192 HAVCR1Q96D42 359 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 SF3B5Q9BWJ5 86 aaKnown RBP16.15■□□□□ 0.18
COL9A3-205ENST00000466192 FAM206AQ9NX38 181 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 TAS2R4Q9NYW5 299 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 CKLFQ9UBR5 152 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 MUC6Q6W4X9 2439 aa16.15■□□□□ 0.18
COL9A3-205ENST00000466192 ZFHX2Q9C0A1 2572 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-205ENST00000466192 CENPXA8MT69 81 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 INMT-MINDY4F8WBC2 141 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 LOC400499M0QZD8 3231 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 ORC5O43913 435 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 CELA3AP09093 270 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 PTHLHP12272 177 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 GDNFP39905 211 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 MMP16P51512 607 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF133P52736 654 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-205ENST00000466192 C10orf128Q5T292 105 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 BCL2L15Q5TBC7 163 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 GALNT16Q8N428 558 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 OR51D1Q8NGF3 324 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 OR2AJ1Q8NGZ0 328 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 ROBO4Q8WZ75 1007 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 SLC7A6Q92536 515 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 CREB3L1Q96BA8 519 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 FOXD3Q9UJU5 478 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-205ENST00000466192 ARGFXA6NJG6 315 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 P2RY10O00398 339 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 ISG15P05161 165 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 NR2C1P13056 603 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 PTH2RP49190 550 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 ARPC4P59998 168 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 KLHL24Q6TFL4 600 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 OR52I2Q8NH67 350 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 BEX2Q9BXY8 128 aa16.14■□□□□ 0.17
COL9A3-205ENST00000466192 MRPL15Q9P015 296 aaKnown RBP16.14■□□□□ 0.17
COL9A3-205ENST00000466192 RTTNQ86VV8 2226 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 FAM172BPA6NC97 362 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 A6NL46 340 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF716A6NP11 495 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 RER1O15258 196 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 LMX1BO60663 402 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 HPNP05981 417 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 CSRP1P21291 193 aaKnown RBP16.13■□□□□ 0.17
COL9A3-205ENST00000466192 DCTDP32321 178 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 NTF4P34130 210 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF704Q6ZNC4 412 aaPredicted RBP16.13■□□□□ 0.17
COL9A3-205ENST00000466192 VASH2Q86V25 355 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 TTTY12Q9BZ98 90 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms