RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TGM6O95932 706 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 PTHP01270 115 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 MT-ND5P03915 603 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ADRA2AP08913 450 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 TACSTD2P09758 323 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ZNF823P16415 610 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 CPEP16870 476 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 NR4A1P22736 598 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ZFP36P26651 326 aaKnown RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 CEACAM8P31997 349 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 PYCR1P32322 319 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 GUCA1AP43080 201 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 OR3A2P47893 321 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 TGM4P49221 684 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ETV1P50549 477 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ZNF84P51523 738 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 TAS2R43P59537 309 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ACTA2P62736 377 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ACTG2P63267 376 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 SRYQ05066 204 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 PIGFQ07326 219 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 CAMK2DQ13557 499 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 RAB39AQ14964 217 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 TRAM1Q15629 374 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ETFDHQ16134 617 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ACSF3Q4G176 576 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 GAGE13Q4V321 117 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 SLC18B1Q6NT16 456 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 KCTD18Q6PI47 426 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 ZNF322Q6U7Q0 402 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 ABHD12BQ7Z5M8 362 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 WDFY1Q8IWB7 410 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 MCEMP1Q8IX19 187 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 CCDC36Q8IYA8 594 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 OR6N1Q8NGY5 312 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 FNDC9Q8TBE3 224 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ABHD3Q8WU67 409 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 C11orf40Q8WZ69 217 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 PHYHIPQ92561 330 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 OTULINQ96BN8 352 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 SNRNP40Q96DI7 357 aaKnown RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 ZMYND19Q96E35 227 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 DNAJA3Q96EY1 480 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 TSSK2Q96PF2 358 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 OR8B4Q96RC9 309 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 RHNO1Q9BSD3 238 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ALG8Q9BVK2 526 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 RBM38Q9H0Z9 239 aaKnown RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 SLCO5A1Q9H2Y9 848 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 C1orf198Q9H425 327 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 NIPAL2Q9H841 368 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 POLE4Q9NR33 117 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 CLEC2DQ9UHP7 191 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 CYB5R1Q9UHQ9 305 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 CAMK2AQ9UQM7 478 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 UGT2A1Q9Y4X1 527 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 CEPT1Q9Y6K0 416 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 COMMD3-BMI1R4GMX3 469 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 SPTBN2O15020 2390 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 IGHV3-15A0A0B4J1V0 119 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 A0A1W2PQL4 384 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 METTL15A6NJ78 407 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 H3BSA7 217 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 H7C1C5 153 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 CCRL2O00421 344 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 MYL12BO14950 172 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 GPRIN2O60269 458 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 UPK3AO75631 287 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 SERPINI2O75830 405 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 WISP2O76076 250 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ABHD16AO95870 558 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 GYPBP06028 91 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 LCKP06239 509 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 CST2P09228 141 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 COX5BP10606 129 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 MSR1P21757 451 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 PSMA1P25786 263 aaKnown RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 MPGP29372 298 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 AGTR1P30556 359 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 FGF9P31371 208 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 UGT2B10P36537 528 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 MAP2K4P45985 399 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 RGS6P49758 472 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 CCR9P51686 369 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 GBX2P52951 348 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 SH3BGRP55822 239 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 LCN6P62502 163 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 RBPJQ06330 500 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 MED22Q15528 200 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 NEDD8Q15843 81 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TIGD6Q17RP2 521 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TIMM50Q3ZCQ8 353 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 ARMCX4Q5H9R4 360 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 PHYHD1Q5SRE7 291 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 TSPO2Q5TGU0 170 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 FBXW9Q5XUX1 488 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 DMKNQ6E0U4 476 aaPredicted RBP4.8□□□□□ -1.64
VPS41-211ENST00000466017 TMEM211Q6ICI0 200 aa4.8□□□□□ -1.64
VPS41-211ENST00000466017 RPL22L1Q6P5R6 122 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms