RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FAM171A2A8MVW0 826 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 RPL36A-HNRNPH2H7BZ11 118 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 MSTNO14793 375 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 RGS5O15539 181 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 KHDRBS3O75525 346 aaKnown RBP14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 HCCSP53701 268 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 PPP3R1P63098 170 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 TP53I3Q53FA7 332 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 MTFR2Q6P444 385 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNF474Q6S9Z5 364 aaPredicted RBP14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 Q6ZT83 130 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 RFLNBQ8N5W9 214 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 RELL2Q8NC24 303 aaPredicted RBP14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 SMAP2Q8WU79 429 aaPredicted RBP14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 ACOT12Q8WYK0 555 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 PHYHIPQ92561 330 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 GHSRQ92847 366 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 RBM24Q9BX46 236 aaKnown RBP14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 SP140LQ9H930 580 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 COPS3Q9UNS2 423 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 COA3Q9Y2R0 106 aaPredicted RBP14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 TMEM14AQ9Y6G1 99 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 V9GYH0 126 aa14.86□□□□□ -0.03
EXOSC3-203ENST00000465229 A8MXE2 369 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNF587BE7ETH6 402 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 PYCARD-AS1I3L0S3 204 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 PFDN1O60925 122 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 TACSTD2P09758 323 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 SLC3A1Q07837 685 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 CEACAM16Q2WEN9 425 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 MZT2AQ6P582 158 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 LUZP2Q86TE4 346 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 CDC20BQ86Y33 519 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 LAX1Q8IWV1 398 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 GABRG1Q8N1C3 465 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 KCTD12Q96CX2 325 aaKnown RBP14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 MIXL1Q9H2W2 232 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 ABCB10Q9NRK6 738 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 JKAMPQ9P055 326 aa14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 USP9XQ93008 2570 aaPredicted RBP14.85□□□□□ -0.03
EXOSC3-203ENST00000465229 hCG_2014768A0A024R1R8 64 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 TRAV1-2A0A0B4J238 106 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 SHISA3A0PJX4 238 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 PHYHO14832 338 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 MAGEB3O15480 346 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 TBX1O43435 398 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 GATBO75879 557 aaKnown RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 GPANK1O95872 356 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 PTBP1P26599 531 aaKnown RBP eCLIP14.84□□□□□ -0.035e-6■■□□□ 13.8
EXOSC3-203ENST00000465229 MPGP29372 298 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 CHRNB4P30926 498 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 GDI2P50395 445 aaKnown RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 C9orf135Q5VTT2 229 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 STEAP3Q658P3 488 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 DNM1P34Q6PK57 102 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 BEND4Q6ZU67 534 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ABHD12BQ7Z5M8 362 aaPredicted RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ZNF511Q8NB15 262 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 FOXN4Q96NZ1 517 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 SDHCQ99643 169 aaPredicted RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ATF6BQ99941 703 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 WDR76Q9H967 626 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ABCB9Q9NP78 766 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 COQ3Q9NZJ6 369 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 GNG8Q9UK08 70 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 SLC5A6Q9Y289 635 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 NCOA6Q14686 2063 aaPredicted RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 UBR5O95071 2799 aaPredicted RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 EEF1E1-BLOC1S5C9J1V9 151 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 EEF1E1O43324 174 aaKnown RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ITGA5P08648 1049 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 IGHV1-2P23083 117 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 MYL9P24844 172 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 CDAP32320 146 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 INSL4Q14641 139 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ACSM3Q53FZ2 586 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 METAP1DQ6UB28 335 aaPredicted RBP14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 CEACAM19Q7Z692 300 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 MRGPRGQ86SM5 289 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 SNX29P2Q8IUI4 249 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 GLB1L2Q8IW92 636 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 LILRB4Q8NHJ6 448 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ASB5Q8WWX0 329 aa14.84□□□□□ -0.03
EXOSC3-203ENST00000465229 ADGRG4Q8IZF6 3080 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 ARL6IP5O75915 188 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 MPZL1O95297 269 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 PTTG1O95997 202 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 ZNF84P51523 738 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 DEFA1P59665 94 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 DEFA3P59666 94 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 ARF1P84077 181 aaKnown RBP14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 GLO1Q04760 184 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 EGR3Q06889 387 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 CDSNQ15517 529 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 STK11Q15831 433 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 XKRXQ6PP77 449 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 LYPD4Q6UWN0 246 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 UNQ9370/PRO34162Q6UXP9 181 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 HTRA1Q92743 480 aa14.83□□□□□ -0.04
EXOSC3-203ENST00000465229 INTS14Q96SY0 518 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms