RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SCRT1Q9BWW7 348 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 OSBPL10Q9BXB5 764 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 OR2AG1Q9H205 316 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 VCX3BQ9H321 246 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 RNF167Q9H6Y7 350 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 NIPAL2Q9H841 368 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 UGT1A10Q9HAW8 530 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 INPP5EQ9NRR6 644 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 SAMSN1Q9NSI8 373 aaKnown RBP3.43□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF229Q9UJW7 825 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 HEBP2Q9Y5Z4 205 aa3.43□□□□□ -1.86
PTCD3-205ENST00000464541 ZNFX1Q9P2E3 1918 aaKnown RBP3.42□□□□□ -1.86
PTCD3-205ENST00000464541 C11orf94C9JXX5 98 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 GOLGA8RI6L899 631 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 SUPT3HO75486 399 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 ATP5HO75947 161 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 CCNB2O95067 398 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 AHSA1O95433 338 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 HLA-HP01893 362 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 GAPDHP04406 335 aaKnown RBP3.42□□□□□ -1.86
PTCD3-205ENST00000464541 RPN2P04844 631 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 GLAP06280 429 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF823P16415 610 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 BCKDHBP21953 392 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 IL32P24001 234 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 DCKP27707 260 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 PMELP40967 661 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 BASP1P80723 227 aaKnown RBP3.42□□□□□ -1.86
PTCD3-205ENST00000464541 SMARCB1Q12824 385 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 OR5I1Q13606 314 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 DMC1Q14565 340 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF470Q6ECI4 717 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 REEP3Q6NUK4 255 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 C1orf94Q6P1W5 598 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 PLEKHG7Q6ZR37 379 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 APRG1Q8IVJ8 170 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 OR52H1Q8NGJ2 320 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 CACNG8Q8WXS5 425 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 NTN4Q9HB63 628 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 SLC38A10Q9HBR0 1119 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 TMEM165Q9HC07 324 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 XCL2Q9UBD3 114 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 PCYOX1Q9UHG3 505 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 DDX19BQ9UMR2 479 aa3.42□□□□□ -1.86
PTCD3-205ENST00000464541 AQRO60306 1485 aaKnown RBP eCLIP3.41□□□□□ -1.862e-9■■■□□ 17
PTCD3-205ENST00000464541 SLIT3O75094 1523 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 A0A0A6YYH2 397 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 TRBV9A0A0B4J1U6 114 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 A0A1W2PPV9 198 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 MGAT4DA6NG13 374 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 A6NJ64 397 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 HSD17B6O14756 317 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 CHST1O43916 411 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 FCN3O75636 299 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 FADS2O95864 444 aaKnown RBP3.41□□□□□ -1.86
PTCD3-205ENST00000464541 IFNW1P05000 195 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 KRT7P08729 469 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF43P17038 809 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 FOXN2P32314 431 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 BTCP35070 178 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 OPRD1P41143 372 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 MRPS22P82650 360 aaKnown RBP3.41□□□□□ -1.86
PTCD3-205ENST00000464541 ITGB3BPQ13352 177 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-205ENST00000464541 PMS2P3Q13401 168 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 GNA13Q14344 377 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 ZNF77Q15935 545 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 SGCAQ16586 387 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 SLC35D2Q76EJ3 337 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 NELFCDQ8IXH7 590 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 SLC7A5P1Q8MH63 180 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 SNX31Q8N9S9 440 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 OR2L8Q8NGY9 312 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 GTF2H4Q92759 462 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.41□□□□□ -1.86
PTCD3-205ENST00000464541 ANGPTL4Q9BY76 406 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 CTPS2Q9NRF8 586 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 EXD2Q9NVH0 621 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 CALYQ9NYX4 217 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 ATP10AO60312 1499 aa3.41□□□□□ -1.86
PTCD3-205ENST00000464541 A0A1W2PRF3 423 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 A0A1W2PRM7 423 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 OR5B21A6NL26 309 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 H3BNH8 94 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 RFXANKO14593 260 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 XKRYO14609 159 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 TOR1AO14656 332 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 ITGB1BP1O14713 200 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 SCAMP2O15127 329 aaKnown RBP3.4□□□□□ -1.87
PTCD3-205ENST00000464541 RAD51BO15315 384 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 SOX15O60248 233 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 SCELO95171 688 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 IGLV2-23P01705 113 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 ZDHHC11BP0C7U3 371 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 OMGP23515 440 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 GABRR2P28476 465 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 TNFSF9P41273 254 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 GPR1P46091 355 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 TSPAN5P62079 268 aa3.4□□□□□ -1.87
PTCD3-205ENST00000464541 HMGCS1Q01581 520 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 366 ms