RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 PYDC1Q8WXC3 89 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM54Q969K7 222 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 EXOSC8Q96B26 276 aaKnown RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 CCDC127Q96BQ5 260 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 CCDC126Q96EE4 140 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF578Q96N58 590 aaPredicted RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TSSK3Q96PN8 268 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TAAR1Q96RJ0 339 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 KCNS3Q9BQ31 491 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TIPINQ9BVW5 301 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 HDHD2Q9H0R4 259 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 CDC42EP4Q9H3Q1 356 aaKnown RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 UGT1A7Q9HAW7 530 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 UGT1A10Q9HAW8 530 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 UGT1A8Q9HAW9 530 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 INIPQ9NRY2 104 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 SAMSN1Q9NSI8 373 aaKnown RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ERGIC3Q9Y282 383 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 AP3M1Q9Y2T2 418 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 USH1CQ9Y6N9 552 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 V9GYQ6 96 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 MAP3K15Q6ZN16 1313 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 POLA1P09884 1462 aaPredicted RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 SCAF11Q99590 1463 aaKnown RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 RLFQ13129 1914 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 TRAV39A0A0B4J263 110 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 A0A1B0GVG6 124 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 OR6C70A6NIJ9 312 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 C9JVG2 144 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 H0YJX3 145 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 PGRMC1O00264 195 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC9A3R1O14745 358 aaPredicted RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 POLR1CO15160 346 aaPredicted RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 RNF13O43567 381 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 NDUFA2O43678 99 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 CACNG3O60359 315 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 ICOSLGO75144 302 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 SS18L1O75177 396 aaPredicted RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 RBBP9O75884 186 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 CIAO1O76071 339 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 RPP14O95059 124 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 DHFRP00374 187 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 OTCP00480 354 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 APOA1P02647 267 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 APOC1P02654 83 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 CALB1P05937 261 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 RALBP11234 206 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 HOXB8P17481 243 aaPredicted RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 F8A1P23610 371 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 HOXA9P31269 272 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 FOXN2P32314 431 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 NSG1P42857 185 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 UBE2AP49459 152 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 CCR6P51684 374 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 AP1S2P56377 157 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 EIF3EP60228 445 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 HERVK_113P61574 105 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 YWHAEP62258 255 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 RPS21P63220 83 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 HPCAP84074 193 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 HMGCS1Q01581 520 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 RELAQ04206 551 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 GLO1Q04760 184 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 SRSF5Q13243 272 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 XRCC4Q13426 336 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 NAB1Q13506 487 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 DGCR6Q14129 220 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 GGTLC2Q14390 218 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 PON2Q15165 354 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM31Q5JXX7 168 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 VAX1Q5SQQ9 334 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 C1orf185Q5T7R7 199 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 PRMT9Q6P2P2 845 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF836Q6ZNA1 936 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 Q6ZVH6 145 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 ASCL5Q7RTU5 278 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 LINC01551Q86U37 167 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 KIF27Q86VH2 1401 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 BBS7Q8IWZ6 715 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 DUSP18Q8NEJ0 188 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 OR7G2Q8NG99 324 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 OR1S2Q8NGQ3 325 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 SRSF12Q8WXF0 261 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC38A4Q969I6 547 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 TMIGD2Q96BF3 282 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 PIK3IP1Q96FE7 263 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 P2RX4Q99571 388 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 CTRCQ99895 268 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 BPIFA3Q9BQP9 254 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC22A4Q9H015 551 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 BLZF1Q9H2G9 400 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 CD209Q9NNX6 404 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 MRPS30Q9NP92 439 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 TREM1Q9NP99 234 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 PARVAQ9NVD7 372 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 NKIRAS1Q9NYS0 192 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 LSM7Q9UK45 103 aaKnown RBP2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 GINS2Q9Y248 185 aa2.38□□□□□ -2.03
HMGXB4-205ENST00000464480 SAMHD1Q9Y3Z3 626 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms