RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SPRY3O43610 288 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 LMX1BO60663 402 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 CDC14BO60729 498 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 SOX14O95416 240 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 ZNF823P16415 610 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 CRYBB2P43320 205 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 DBPQ10586 325 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-202ENST00000463440 ECH1Q13011 328 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 PSG7Q13046 419 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 TRIP10Q15642 601 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 CHRFAM7AQ494W8 412 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 TMEM255AQ5JRV8 349 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 LINC00346Q8IVM7 164 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 SLC37A3Q8NCC5 494 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 OR5L1Q8NGL2 311 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 DIRC2Q96SL1 478 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 DDOQ99489 341 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 FEVQ99581 238 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 EGLN1Q9GZT9 426 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 ARMC1Q9NVT9 282 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 CDC42EP3Q9UKI2 254 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 POMPQ9Y244 141 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 STARD10Q9Y365 291 aa13.83□□□□□ -0.2
COL1A1-202ENST00000463440 ZSCAN5BA6NJL1 495 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 E2F6O75461 281 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 RP2O75695 350 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 TGFAP01135 160 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 IFNGP01579 166 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 IGHV1-46P01743 117 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 ADH4P08319 380 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 DBHP09172 617 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 KITLGP21583 273 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 PYCR1P32322 319 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 RASSF2P50749 326 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 BNIP1Q12981 228 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 ZNF362Q5T0B9 420 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-202ENST00000463440 SLC18B1Q6NT16 456 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 USP51Q70EK9 711 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 PRIMA1Q86XR5 153 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 OR4Q3Q8NH05 313 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 TEX47Q8TBZ9 253 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 PTP4A1Q93096 173 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 APOBEC3DQ96AK3 386 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-202ENST00000463440 CMBLQ96DG6 245 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 ELMOD3Q96FG2 381 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 PITX2Q99697 317 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 NIPSNAP1Q9BPW8 284 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 POFUT1Q9H488 388 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 PDP1Q9P0J1 537 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-202ENST00000463440 LPAR3Q9UBY5 353 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 CYB5R1Q9UHQ9 305 aa13.82□□□□□ -0.2
COL1A1-202ENST00000463440 PURGQ9UJV8 347 aaKnown RBP13.82□□□□□ -0.2
COL1A1-202ENST00000463440 TCRBV3S1A0A5B6 114 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 RIIAD1A6NNX1 92 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 H3BN98 237 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 GSC2O15499 205 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 ATP5HO75947 161 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 RAC2P15153 192 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 IL2RGP31785 369 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 GGT2P36268 569 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 CRMP1Q14194 572 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 HFEQ30201 348 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 CFAP77Q6ZQR2 320 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 LINC01356Q8N9X3 169 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 OR9Q1Q8NGQ5 310 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 HAVCR1Q96D42 359 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 ATF6BQ99941 703 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 RBM4Q9BWF3 364 aaKnown RBP13.81□□□□□ -0.2
COL1A1-202ENST00000463440 BEX2Q9BXY8 128 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 CADM1Q9BY67 442 aaKnown RBP13.81□□□□□ -0.2
COL1A1-202ENST00000463440 SHARPINQ9H0F6 387 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 ZNF556Q9HAH1 456 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 MSL2Q9HCI7 577 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 MRPL22Q9NWU5 206 aaKnown RBP13.81□□□□□ -0.2
COL1A1-202ENST00000463440 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
COL1A1-202ENST00000463440 ABCA2Q9BZC7 2435 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 FKBP6O75344 327 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 CD55P08174 381 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 ZNF3P17036 446 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 TNFSF4P23510 183 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 FMO3P31513 532 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 SLC25A1P53007 311 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 CBX1P83916 185 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 CDK5R2Q13319 367 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 CCNIQ14094 377 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 OR51L1Q8NGJ5 315 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 CLDND2Q8NHS1 167 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 SOX7Q9BT81 388 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 NARFLQ9H6Q4 476 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 CMC2Q9NRP2 79 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 PTTG3PQ9NZH4 202 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 DNAJB9Q9UBS3 223 aa13.8□□□□□ -0.2
COL1A1-202ENST00000463440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL1A1-202ENST00000463440 TVP23AA6NH52 213 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 CLDN25C9JDP6 229 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 F5H5K5 113 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 IFNA2P01563 188 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 SPI1P17947 270 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 HNF1AP20823 631 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms