RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 HSF2Q03933 536 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 GK3PQ14409 553 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 KCNMB1Q16558 191 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 MEP1BQ16820 701 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 TBC1D28Q2M2D7 210 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 TUSC1Q2TAM9 212 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ALKBH6Q3KRA9 238 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 CLEC12AQ5QGZ9 265 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC35F1Q5T1Q4 408 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 LEG1Q6P5S2 330 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 SHQ1Q6PI26 577 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 CD300LDQ6UXZ3 194 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 RFPL4BQ6ZWI9 263 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ASRGL1Q7L266 308 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 VASH1Q7L8A9 365 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 C1QL2Q7Z5L3 287 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 SYT9Q86SS6 491 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 PEG10Q86TG7 708 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZBTB46Q86UZ6 589 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF101Q8IZC7 436 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 HS3ST5Q8IZT8 346 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR6V1Q8N148 313 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC26A10Q8NG04 563 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF418Q8TF45 676 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNRF4Q8WWF5 429 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 C11orf40Q8WZ69 217 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 GTF3AQ92664 365 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 NMNAT3Q96T66 252 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 IFT27Q9BW83 186 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 POFUT1Q9H488 388 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 NTN4Q9HB63 628 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 CDH20Q9HBT6 801 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 CCNB1IP1Q9NPC3 277 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 MRPL22Q9NWU5 206 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 PCDHB10Q9UN67 800 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 B9D1Q9UPM9 204 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 GRIP1Q9Y3R0 1128 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 IQCMA0A1B0GVH7 501 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 A0A1W2PPW3 197 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR6C6A6NF89 314 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 C12orf71A8MTZ7 269 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 C17orf100A8MU93 164 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 IDH3BO43837 385 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 DOK2O60496 412 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 ATP5HO75947 161 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 PTHP01270 115 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 IGHV2-5P01817 119 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 FAM157BP0CG42 384 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 COX5BP10606 129 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF250P15622 560 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 ADRA2CP18825 462 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 STOMP27105 288 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 APLNRP35414 380 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 UCP2P55851 309 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 LSM6P62312 80 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 HIST1H3AP68431 136 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 GALK2Q01415 458 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 AQP6Q13520 282 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 CCDC92Q53HC0 331 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 AWAT1Q58HT5 328 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 AVPI1Q5T686 147 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 HIST2H3PS2Q5TEC6 136 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 RPL13AP3Q6NVV1 102 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 FAHD2BQ6P2I3 314 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 LYPD4Q6UWN0 246 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 HIST2H3AQ71DI3 136 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 JAZF1Q86VZ6 243 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 GLB1L2Q8IW92 636 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 LNX2Q8N448 690 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 C3orf56Q8N813 242 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZDHHC22Q8N966 263 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 CYB561A3Q8NBI2 242 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC37A3Q8NCC5 494 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR52L1Q8NGH7 329 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR52E2Q8NGJ4 325 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 SGMS2Q8NHU3 365 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 GIPC3Q8TF64 312 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 FAHD2AQ96GK7 314 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 FEVQ99581 238 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC6A7Q99884 636 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 WACQ9BTA9 647 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 RBM4Q9BWF3 364 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 TSSK6Q9BXA6 273 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 NMNAT2Q9BZQ4 307 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 KCNN2Q9H2S1 579 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR51B6Q9H340 312 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 RERGLQ9H628 205 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF665Q9H7R5 613 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 RPRD1BQ9NQG5 326 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 TBC1D23Q9NUY8 699 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 ASH2LQ9UBL3 628 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 OPN4Q9UHM6 478 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 TIMM10BQ9Y5J6 103 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 CACNG2Q9Y698 323 aa6.72□□□□□ -1.33
CDC42BPA-210ENST00000462553 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 C5orf49A4QMS7 147 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 TRIM77I1YAP6 450 aa6.71□□□□□ -1.34
CDC42BPA-210ENST00000462553 RER1O15258 196 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms