RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 OR8D4Q8NGM9 314 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 TIMD4Q96H15 378 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 DIRC2Q96SL1 478 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 EGLN1Q9GZT9 426 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 REEP1Q9H902 201 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 LPAR2Q9HBW0 351 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 MSL2Q9HCI7 577 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 SRA1Q9HD15 236 aaKnown RBP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 TUBG2Q9NRH3 451 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 VNN3Q9NY84 501 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 TREM2Q9NZC2 230 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 PURGQ9UJV8 347 aaKnown RBP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 ZDHHC8Q9ULC8 765 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 SAMHD1Q9Y3Z3 626 aaKnown RBP8.64□□□□□ -1.03
SF3A3-204ENST00000462258 WIPI2Q9Y4P8 454 aa8.64□□□□□ -1.03
SF3A3-204ENST00000462258 RNF212BA8MTL3 300 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 PHF1O43189 567 aaPredicted RBP8.63□□□□□ -1.03
SF3A3-204ENST00000462258 IDH3BO43837 385 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 UBOX5O94941 541 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 HLA-DQA2P01906 255 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 MSMBP08118 114 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 T-ENOLP0DO92 83 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 KITLGP21583 273 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 TNFSF4P23510 183 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 ERFP50548 548 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 HMGA2P52926 109 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 HIST1H3AP68431 136 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 TNFAIP6P98066 277 aaPredicted RBP8.63□□□□□ -1.03
SF3A3-204ENST00000462258 MS4A2Q01362 244 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 SLC36A3Q495N2 470 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 FAM98BQ52LJ0 330 aaKnown RBP8.63□□□□□ -1.03
SF3A3-204ENST00000462258 HIST2H3PS2Q5TEC6 136 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 OR2T5Q6IEZ7 315 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 SLC18B1Q6NT16 456 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 CFAP77Q6ZQR2 320 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 RASSF6Q6ZTQ3 369 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 HIST2H3AQ71DI3 136 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 LINC00346Q8IVM7 164 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 CYB561A3Q8NBI2 242 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 PROKR2Q8NFJ6 384 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 OR2T29Q8NH02 315 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 OR51F2Q8NH61 342 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 CCL17Q92583 94 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 POP5Q969H6 163 aaKnown RBP8.63□□□□□ -1.03
SF3A3-204ENST00000462258 APOBEC3DQ96AK3 386 aaPredicted RBP8.63□□□□□ -1.03
SF3A3-204ENST00000462258 TMEM186Q96B77 213 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 RAB39BQ96DA2 213 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 CLPTM1LQ96KA5 538 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 LRGUKQ96M69 825 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 C1orf21Q9H246 121 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF665Q9H7R5 613 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 PTTG3PQ9NZH4 202 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 TMEFF2Q9UIK5 374 aaPredicted RBP8.63□□□□□ -1.03
SF3A3-204ENST00000462258 STARD10Q9Y365 291 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 U3KQV3 271 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 DYSFO75923 2080 aa8.63□□□□□ -1.03
SF3A3-204ENST00000462258 ISPDA4D126 451 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 SOX14O95416 240 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 GASTP01350 101 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 RAP2AP10114 183 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 PYCR1P32322 319 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 SRP14P37108 136 aaKnown RBP8.62□□□□□ -1.03
SF3A3-204ENST00000462258 LMO4P61968 165 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 SLC3A1Q07837 685 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 CDK5R2Q13319 367 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 HLXQ14774 488 aaPredicted RBP8.62□□□□□ -1.03
SF3A3-204ENST00000462258 SPRNQ5BIV9 151 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 FBXW12Q6X9E4 464 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 Q6ZR03 302 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 OR5AS1Q8N127 324 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 OR2Z1Q8NG97 314 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 OR10G2Q8NGC3 310 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 OR5L1Q8NGL2 311 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 OR2T4Q8NH00 348 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 RAB1CQ92928 201 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 CMBLQ96DG6 245 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 PITX2Q99697 317 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 ATF6BQ99941 703 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 GAL3ST1Q99999 423 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 THTPAQ9BU02 230 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 DGCR6LQ9BY27 220 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 ARMC1Q9NVT9 282 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 HIF1ANQ9NWT6 349 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 MRPL22Q9NWU5 206 aaKnown RBP8.62□□□□□ -1.03
SF3A3-204ENST00000462258 TAS2R1Q9NYW7 299 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 IL20Q9NYY1 176 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 CYB5R1Q9UHQ9 305 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 KCNG2Q9UJ96 466 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 KLHL21Q9UJP4 597 aa8.62□□□□□ -1.03
SF3A3-204ENST00000462258 TRAV20A0A0B4J274 112 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 DHRS12A0PJE2 317 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 DEAF1O75398 565 aaPredicted RBP8.61□□□□□ -1.03
SF3A3-204ENST00000462258 IGHV2-5P01817 119 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 RAC2P15153 192 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 ZNF823P16415 610 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 TNFRSF1AP19438 455 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 THBS2P35442 1172 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 GGT2P36268 569 aa8.61□□□□□ -1.03
SF3A3-204ENST00000462258 TRAP1Q12931 704 aaKnown RBP8.61□□□□□ -1.03
SF3A3-204ENST00000462258 ECH1Q13011 328 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms