RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CDC14CA4D256 554 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 NSA2O95478 260 aaKnown RBP16.52■□□□□ 0.23
HPS3-204ENST00000462030 NUDT14O95848 222 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 TNFP01375 233 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 ERCC1P07992 297 aaPredicted RBP16.52■□□□□ 0.23
HPS3-204ENST00000462030 MAOBP27338 520 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 PPICP45877 212 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 C1orf100Q5SVJ3 147 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 TMPPEQ6ZT21 453 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 MAMDC2Q7Z304 686 aaPredicted RBP16.52■□□□□ 0.23
HPS3-204ENST00000462030 ARMC10Q8N2F6 343 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 CHST4Q8NCG5 386 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 PTPMT1Q8WUK0 201 aaPredicted RBP16.52■□□□□ 0.23
HPS3-204ENST00000462030 FAM46BQ96A09 425 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 PIK3IP1Q96FE7 263 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 NRSN2Q9GZP1 204 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 LAT2Q9GZY6 243 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 FN3KRPQ9HA64 309 aa16.52■□□□□ 0.23
HPS3-204ENST00000462030 COA3Q9Y2R0 106 aaPredicted RBP16.52■□□□□ 0.23
HPS3-204ENST00000462030 KIR2DS5A0A0G2JLQ3 304 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 A0A0G2JNG1 304 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 KIR2DS3K7RE56 304 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 ZNF208O43345 1280 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 HRH1P35367 487 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 KIR2DS5Q14953 304 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 SGCBQ16585 318 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 LYPD6Q86Y78 171 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 GTPBP8Q8N3Z3 284 aaPredicted RBP16.51■□□□□ 0.23
HPS3-204ENST00000462030 ZDHHC22Q8N966 263 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 FOXRED1Q96CU9 486 aaPredicted RBP16.51■□□□□ 0.23
HPS3-204ENST00000462030 SELENOIQ9C0D9 397 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 OR8D2Q9GZM6 311 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 IGFLR1Q9H665 355 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 G6PC2Q9NQR9 355 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 VSX1Q9NZR4 365 aaPredicted RBP16.51■□□□□ 0.23
HPS3-204ENST00000462030 CSAG2Q9Y5P2 127 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 R4GMQ9 66 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 C13orf42A0A1B0GVH6 325 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 LOC390937A0A1W2PQ73 354 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 ARRB1P49407 418 aaPredicted RBP16.51■□□□□ 0.23
HPS3-204ENST00000462030 HSD17B7P56937 341 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 PHF19Q5T6S3 580 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 PAQR4Q8N4S7 273 aaPredicted RBP16.51■□□□□ 0.23
HPS3-204ENST00000462030 GAL3ST4Q96RP7 486 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 TMEM231Q9H6L2 316 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 CNTD2Q9H8S5 307 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 ZNF629Q9UEG4 869 aaPredicted RBP16.51■□□□□ 0.23
HPS3-204ENST00000462030 MKL2Q9ULH7 1088 aa16.51■□□□□ 0.23
HPS3-204ENST00000462030 RANBP2P49792 3224 aaKnown RBP16.51■□□□□ 0.23
HPS3-204ENST00000462030 MEGF11A6BM72 1044 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 C5orf51A6NDU8 294 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 F8W036 122 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 CRHP06850 196 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 PVALBP20472 110 aaPredicted RBP16.5■□□□□ 0.23
HPS3-204ENST00000462030 BLOC1S1P78537 153 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 ZP2Q05996 745 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 UNC119Q13432 240 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 LINC00346Q8IVM7 164 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 OR4K17Q8NGC6 315 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 DCUN1D4Q92564 292 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 MAP3K3Q99759 626 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 TLNRD1Q9H1K6 362 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 TXNIPQ9H3M7 391 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 ESRP2Q9H6T0 727 aaKnown RBP16.5■□□□□ 0.23
HPS3-204ENST00000462030 CHMP1AQ9HD42 196 aaPredicted RBP16.5■□□□□ 0.23
HPS3-204ENST00000462030 OR52A1Q9UKL2 312 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 ARPC4-TTLL3A0A0A6YYG9 625 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 P2RY10O00398 339 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 EFSO43281 561 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 AKT2P31751 481 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 HOXA1P49639 335 aaPredicted RBP16.5■□□□□ 0.23
HPS3-204ENST00000462030 YPEL5P62699 121 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 RAB11FIP2Q7L804 512 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 KDM8Q8N371 416 aa16.5■□□□□ 0.23
HPS3-204ENST00000462030 A0A0B4J2A0 478 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 BLACEA4D250 179 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 F8VVB4 439 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 F8VWA3 439 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 NUDT21O43809 227 aaKnown RBP16.49■□□□□ 0.23
HPS3-204ENST00000462030 CA3P07451 260 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 PSMB6P28072 239 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 SERPINF1P36955 418 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 PNLIPRP2P54317 469 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 OR4A4PQ8NGN8 299 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 STOML3Q8TAV4 291 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 ELP5Q8TE02 316 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 TMED6Q8WW62 240 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 PTX4Q96A99 478 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 RRNAD1Q96FB5 475 aaKnown RBP16.49■□□□□ 0.23
HPS3-204ENST00000462030 SHPKQ9UHJ6 478 aa16.49■□□□□ 0.23
HPS3-204ENST00000462030 METTL21EPA6NDL7 271 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 B4DGG1 531 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 HLA-DOBP13765 273 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 GNB3P16520 340 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 MPZP25189 248 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 SLC6A8P48029 635 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 H3F3CQ6NXT2 135 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 ADAMTS18Q8TE60 1221 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 C12orf57Q99622 126 aa16.48■□□□□ 0.23
HPS3-204ENST00000462030 MICU1Q9BPX6 476 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms