RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 COX10Q12887 443 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 TSPAN31Q12999 210 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 SHQ1Q6PI26 577 aaKnown RBP16.02■□□□□ 0.16
VARS-220ENST00000461874 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.02■□□□□ 0.16
VARS-220ENST00000461874 PEG10Q86TG7 708 aaKnown RBP16.02■□□□□ 0.16
VARS-220ENST00000461874 SLC26A10Q8NG04 563 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 OR2Z1Q8NG97 314 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 GNPDA2Q8TDQ7 276 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 COQ7Q99807 217 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 HDHD2Q9H0R4 259 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 DCAF16Q9NXF7 216 aa16.02■□□□□ 0.16
VARS-220ENST00000461874 WNK2Q9Y3S1 2297 aa16.02■□□□□ 0.15
VARS-220ENST00000461874 KRT36O76013 467 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 AVPP01185 164 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 TNFRSF1AP19438 455 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 NOS3P29474 1203 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 MNAT1P51948 309 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 HMGA2P52926 109 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 MXRA7P84157 204 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 DBPQ10586 325 aaPredicted RBP16.01■□□□□ 0.15
VARS-220ENST00000461874 HNRNPA0Q13151 305 aaKnown RBP16.01■□□□□ 0.15
VARS-220ENST00000461874 PGBD2Q6P3X8 592 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 CORO6Q6QEF8 472 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 FBXW12Q6X9E4 464 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 ZNF620Q6ZNG0 422 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 C1orf229Q6ZS94 237 aaPredicted RBP16.01■□□□□ 0.15
VARS-220ENST00000461874 ZBTB46Q86UZ6 589 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 OR5L1Q8NGL2 311 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 APOBEC3DQ96AK3 386 aaPredicted RBP16.01■□□□□ 0.15
VARS-220ENST00000461874 RPRD1BQ9NQG5 326 aaKnown RBP16.01■□□□□ 0.15
VARS-220ENST00000461874 TMEM106BQ9NUM4 274 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 NPTNQ9Y639 398 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 ANK2Q01484 3957 aa16.01■□□□□ 0.15
VARS-220ENST00000461874 A0A0G2JMP0 313 aa16■□□□□ 0.15
VARS-220ENST00000461874 A0A0X1KG70 313 aa16■□□□□ 0.15
VARS-220ENST00000461874 ISPDA4D126 451 aa16■□□□□ 0.15
VARS-220ENST00000461874 OR6C68A6NDL8 312 aa16■□□□□ 0.15
VARS-220ENST00000461874 IGHV2-70P01814 119 aa16■□□□□ 0.15
VARS-220ENST00000461874 HLXQ14774 488 aaPredicted RBP16■□□□□ 0.15
VARS-220ENST00000461874 RSPO1Q2MKA7 263 aaPredicted RBP16■□□□□ 0.15
VARS-220ENST00000461874 ZNF771Q7L3S4 317 aaPredicted RBP16■□□□□ 0.15
VARS-220ENST00000461874 TEX29Q8N6K0 151 aa16■□□□□ 0.15
VARS-220ENST00000461874 ZNF283Q8N7M2 679 aa16■□□□□ 0.15
VARS-220ENST00000461874 OR4M2Q8NGB6 313 aa16■□□□□ 0.15
VARS-220ENST00000461874 ITLN1Q8WWA0 313 aa16■□□□□ 0.15
VARS-220ENST00000461874 TMPRSS13Q9BYE2 586 aa16■□□□□ 0.15
VARS-220ENST00000461874 OCEL1Q9H607 264 aa16■□□□□ 0.15
VARS-220ENST00000461874 PTTG3PQ9NZH4 202 aa16■□□□□ 0.15
VARS-220ENST00000461874 ACTR3BQ9P1U1 418 aa16■□□□□ 0.15
VARS-220ENST00000461874 IL19Q9UHD0 177 aa16■□□□□ 0.15
VARS-220ENST00000461874 J3QLI3 93 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 SURF4O15260 269 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 SBK2P0C263 348 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 SCGB2A2Q13296 93 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 KRTAP27-1Q3LI81 207 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 SLC36A3Q495N2 470 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 SLC18B1Q6NT16 456 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 CYP2R1Q6VVX0 501 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 FITM2Q8N6M3 262 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 SDR9C7Q8NEX9 313 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 OR52E2Q8NGJ4 325 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 UBAP1Q9NZ09 502 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 LYVE1Q9Y5Y7 322 aa15.99■□□□□ 0.15
VARS-220ENST00000461874 LOC105371242A0A075B767 164 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 A0A0A6YYJ9 748 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 B2RBV5 119 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 TNFRSF11BO00300 401 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 ATP6V1B2P21281 511 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 GGT2P36268 569 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 RBMXP38159 391 aaKnown RBP15.98■□□□□ 0.15
VARS-220ENST00000461874 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.98■□□□□ 0.15
VARS-220ENST00000461874 SLC35F1Q5T1Q4 408 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 DCAF12L2Q5VW00 463 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 OR2T2Q6IF00 324 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 CFAP77Q6ZQR2 320 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 COLCA1Q6ZS62 124 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 LINC00346Q8IVM7 164 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 OR5AS1Q8N127 324 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 LINC00471Q8N535 108 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 ATG16L2Q8NAA4 619 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 OR8G5Q8NG78 346 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 OR2V2Q96R30 315 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 DDOQ99489 341 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 BTBD10Q9BSF8 475 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 CDADC1Q9BWV3 514 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 TRIM15Q9C019 465 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 FN3KQ9H479 309 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 EGLN3Q9H6Z9 239 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 CYB5R1Q9UHQ9 305 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 PPP1R3CQ9UQK1 317 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 CDH10Q9Y6N8 788 aa15.98■□□□□ 0.15
VARS-220ENST00000461874 VENTXO95231 258 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 GATA3P23771 443 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 MAGEA2P43356 314 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 LCN2P80188 198 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 ECH1Q13011 328 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 TMEM155Q4W5P6 130 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 CLEC12AQ5QGZ9 265 aa15.97■□□□□ 0.15
VARS-220ENST00000461874 ZNF770Q6IQ21 691 aaPredicted RBP15.97■□□□□ 0.15
VARS-220ENST00000461874 RPL13AP3Q6NVV1 102 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms