RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TNFAIP6P98066 277 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 SRSF2Q01130 221 aaKnown RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 COX10Q12887 443 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 RSPO1Q2MKA7 263 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 KRTAP27-1Q3LI81 207 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 C1orf94Q6P1W5 598 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 FAHD2BQ6P2I3 314 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 DNM1P34Q6PK57 102 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 FBXW12Q6X9E4 464 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 Q6ZR03 302 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 RINLQ6ZS11 566 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 COLCA1Q6ZS62 124 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 PEG10Q86TG7 708 aaKnown RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 ZBTB46Q86UZ6 589 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 LRRC28Q86X40 367 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 OR6V1Q8N148 313 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 ZNF283Q8N7M2 679 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 GJC3Q8NFK1 279 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 OR5L1Q8NGL2 311 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 MCUR1Q96AQ8 359 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 FAHD2AQ96GK7 314 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 NSMCE2Q96MF7 247 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 ERMAPQ96PL5 475 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 COQ7Q99807 217 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 TMPRSS13Q9BYE2 586 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 HDHD2Q9H0R4 259 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 OR52D1Q9H346 318 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 METTL17Q9H7H0 456 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 TMEM106BQ9NUM4 274 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 IL19Q9UHD0 177 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 IL20RAQ9UHF4 553 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 TAGLN3Q9UI15 199 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 ARL2BPQ9Y2Y0 163 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 POLR3KQ9Y2Y1 108 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-207ENST00000461798 NPTNQ9Y639 398 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 LHFPL6Q9Y693 200 aa7.74□□□□□ -1.17
BRCA1-207ENST00000461798 A0A0G2JMP0 313 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 A0A0X1KG70 313 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 A0A1B0GWJ7 208 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 IFNL4K9M1U5 179 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 ARPC2O15144 300 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 SURF4O15260 269 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 KRT36O76013 467 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 VENTXO95231 258 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 PPP1R3DO95685 299 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 IGHV2-70P01814 119 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 TNFSF4P23510 183 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 CPT2P23786 658 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 MSX2P35548 267 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-207ENST00000461798 TSPAN31Q12999 210 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 TMEM155Q4W5P6 130 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 SLC27A4Q6P1M0 643 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 USP43Q70EL4 1123 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 C1QL2Q7Z5L3 287 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 SLC26A10Q8NG04 563 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 OR4M2Q8NGB6 313 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 GNPDA2Q8TDQ7 276 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 SLC7A6Q92536 515 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 APOBEC3DQ96AK3 386 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-207ENST00000461798 TSSK2Q96PF2 358 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 NMNAT3Q96T66 252 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 DDOQ99489 341 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 GAL3ST1Q99999 423 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 FAM107BQ9H098 131 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 RERGLQ9H628 205 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 SRA1Q9HD15 236 aaKnown RBP7.73□□□□□ -1.17
BRCA1-207ENST00000461798 ARL8BQ9NVJ2 186 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 NDE1Q9NXR1 346 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 TMCC3Q9ULS5 477 aa7.73□□□□□ -1.17
BRCA1-207ENST00000461798 OR6C68A6NDL8 312 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 OR10H3O60404 316 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 FOXH1O75593 365 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 DCTN3O75935 186 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 FSTL3O95633 263 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 GPANK1O95872 356 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 RENP00797 406 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 FSHBP01225 129 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 FABP3P05413 133 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 DBHP09172 617 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 HIST1H1CP16403 213 aaKnown RBP7.72□□□□□ -1.17
BRCA1-207ENST00000461798 GGT2P36268 569 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 ERFP50548 548 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 MNAT1P51948 309 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 SPIBQ01892 262 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 ECH1Q13011 328 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 SLC36A3Q495N2 470 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 OTPQ5XKR4 325 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 SLC18B1Q6NT16 456 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 PGBD2Q6P3X8 592 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 LEG1Q6P5S2 330 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 SHQ1Q6PI26 577 aaKnown RBP7.72□□□□□ -1.17
BRCA1-207ENST00000461798 C16orf89Q6UX73 402 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 LINC00471Q8N535 108 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 SPICQ8N5J4 248 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 SEMA6DQ8NFY4 1073 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 OR8G5Q8NG78 346 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 OR2Z1Q8NG97 314 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 OR13G1Q8NGZ3 307 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 OR4K13Q8NH42 304 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms