RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 ZNF454Q8N9F8 522 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 KBTBD8Q8NFY9 601 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 OR51G2Q8NGK0 314 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 OR10S1Q8NGN2 331 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 OR1J2Q8NGS2 313 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 OTOSQ8NHW6 89 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 CNIH3Q8TBE1 160 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 ST7LQ8TDW4 575 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 SMAP2Q8WU79 429 aaPredicted RBP11.93□□□□□ -0.5
CHRD-209ENST00000461120 RADILQ96JH8 1075 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 POM121L2Q96KW2 1035 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 COQ7Q99807 217 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 HDHD2Q9H0R4 259 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 CDH20Q9HBT6 801 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 PNRC2Q9NPJ4 139 aaKnown RBP11.93□□□□□ -0.5
CHRD-209ENST00000461120 ATPIF1Q9UII2 106 aa11.93□□□□□ -0.5
CHRD-209ENST00000461120 APOL3O95236 402 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 SBK2P0C263 348 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 MTNR1AP48039 350 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 NUDT6P53370 316 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 HCCSP53701 268 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 HGFACQ04756 655 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 ZNF91Q05481 1191 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 POU4F2Q12837 409 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 ECH1Q13011 328 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 SLC22A25Q6T423 547 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 THAP5Q7Z6K1 395 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 PAQR4Q8N4S7 273 aaPredicted RBP11.92□□□□□ -0.5
CHRD-209ENST00000461120 FBLIM1Q8WUP2 373 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 SLC7A6Q92536 515 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 RNFT2Q96EX2 444 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 AMELYQ99218 206 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 ATF6BQ99941 703 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 FOXC2Q99958 501 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 ABHD6Q9BV23 337 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 CLEC4MQ9H2X3 399 aaPredicted RBP11.92□□□□□ -0.5
CHRD-209ENST00000461120 KLHDC2Q9Y2U9 406 aa11.92□□□□□ -0.5
CHRD-209ENST00000461120 HEATR1Q9H583 2144 aaKnown RBP11.92□□□□□ -0.5
CHRD-209ENST00000461120 C5orf49A4QMS7 147 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 LYNP07948 512 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 DBTP11182 482 aaKnown RBP11.91□□□□□ -0.5
CHRD-209ENST00000461120 ALOX5APP20292 161 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 CCNOP22674 350 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 MYF6P23409 242 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 CDK5R2Q13319 367 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 SMN1Q16637 294 aaKnown RBP11.91□□□□□ -0.5
CHRD-209ENST00000461120 RSPO1Q2MKA7 263 aaPredicted RBP11.91□□□□□ -0.5
CHRD-209ENST00000461120 SPATC1Q76KD6 591 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 TMEM200AQ86VY9 491 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 SLC35F2Q8IXU6 374 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 OR4F15Q8NGB8 312 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 LILRB1Q8NHL6 650 aaPredicted RBP11.91□□□□□ -0.5
CHRD-209ENST00000461120 THEM6Q8WUY1 208 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 RNF133Q8WVZ7 376 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 NEUROG1Q92886 237 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 MNTQ99583 582 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 ZNF184Q99676 751 aaPredicted RBP11.91□□□□□ -0.5
CHRD-209ENST00000461120 ANKRD60Q9BZ19 345 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 AMBNQ9NP70 447 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 DDX28Q9NUL7 540 aaKnown RBP11.91□□□□□ -0.5
CHRD-209ENST00000461120 LAMP5Q9UJQ1 280 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 RAB26Q9ULW5 256 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 COPS3Q9UNS2 423 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 RPL36Q9Y3U8 105 aaKnown RBP11.91□□□□□ -0.5
CHRD-209ENST00000461120 ATP23Q9Y6H3 246 aa11.91□□□□□ -0.5
CHRD-209ENST00000461120 ZNF878C9JN71 531 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 DBHP09172 617 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 NR4A1P22736 598 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 ATP6V1E1P36543 226 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 NKX6-1P78426 367 aaPredicted RBP11.9□□□□□ -0.5
CHRD-209ENST00000461120 GALK2Q01415 458 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 KRTAP27-1Q3LI81 207 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 ZNF672Q499Z4 452 aaPredicted RBP11.9□□□□□ -0.5
CHRD-209ENST00000461120 LAIR2Q6ISS4 152 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 NUP37Q8NFH4 326 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 AKAP1Q92667 903 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHRD-209ENST00000461120 LGALS12Q96DT0 336 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 CXXC4Q9H2H0 198 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 POU2F3Q9UKI9 436 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 EXOGQ9Y2C4 368 aaKnown RBP11.9□□□□□ -0.5
CHRD-209ENST00000461120 SPEF1Q9Y4P9 236 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 TMEM14AQ9Y6G1 99 aa11.9□□□□□ -0.5
CHRD-209ENST00000461120 ROS1P08922 2347 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 E7EQL1 145 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 ZNF670-ZNF695F2Z2N8 137 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 J3QRE1 110 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 HS3ST1O14792 307 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 OR2T7P0C7T2 308 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 PCSK6P29122 969 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 OPRL1P41146 370 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 WNT5AP41221 380 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 SNTB2Q13425 540 aaKnown RBP11.89□□□□□ -0.51
CHRD-209ENST00000461120 TAF13Q15543 124 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 KRT80Q6KB66 452 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
CHRD-209ENST00000461120 RHOUQ7L0Q8 258 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 RFLNBQ8N5W9 214 aa11.89□□□□□ -0.51
CHRD-209ENST00000461120 OR10H4Q8NGA5 316 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms