RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 DNAJC8O75937 253 aaPredicted RBP19.58■□□□□ 0.72
PTPN4-208ENST00000460289 IGHV1-46P01743 117 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 ADH4P08319 380 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 PSG7Q13046 419 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 FLOT2Q14254 428 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 CORO6Q6QEF8 472 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 CD300LDQ6UXZ3 194 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 OR2T33Q8NG76 320 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 OR8D4Q8NGM9 314 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 GIPC3Q8TF64 312 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 GTF3AQ92664 365 aaKnown RBP19.58■□□□□ 0.72
PTPN4-208ENST00000460289 DDOQ99489 341 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 BEX2Q9BXY8 128 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 FN3KQ9H479 309 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 YY1AP1Q9H869 796 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 KCNG2Q9UJ96 466 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 ABCA2Q9BZC7 2435 aa19.58■□□□□ 0.72
PTPN4-208ENST00000460289 ANK3Q12955 4377 aaKnown RBP19.57■□□□□ 0.72
PTPN4-208ENST00000460289 CDC14BO60729 498 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 ZNF823P16415 610 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 ECH1Q13011 328 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 HFEQ30201 348 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 TMEM255AQ5JRV8 349 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 ZNF362Q5T0B9 420 aaPredicted RBP19.57■□□□□ 0.72
PTPN4-208ENST00000460289 SPATA24Q86W54 205 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 CYB561A3Q8NBI2 242 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 PROKR2Q8NFJ6 384 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 HAVCR1Q96D42 359 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 CMBLQ96DG6 245 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 ELMOD3Q96FG2 381 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 FEVQ99581 238 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 SHARPINQ9H0F6 387 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 CYB5R1Q9UHQ9 305 aa19.57■□□□□ 0.72
PTPN4-208ENST00000460289 ARRDC5A6NEK1 342 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 ZSCAN5BA6NJL1 495 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 IFNA2P01563 188 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 DBHP09172 617 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 KITLGP21583 273 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 GGT2P36268 569 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 SLC18B1Q6NT16 456 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 USP51Q70EK9 711 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 LINC01356Q8N9X3 169 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 SLC37A3Q8NCC5 494 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 APOBEC3DQ96AK3 386 aaPredicted RBP19.56■□□□□ 0.72
PTPN4-208ENST00000460289 C1orf159Q96HA4 380 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 PITX2Q99697 317 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 SOX7Q9BT81 388 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 PURGQ9UJV8 347 aaKnown RBP19.56■□□□□ 0.72
PTPN4-208ENST00000460289 POMPQ9Y244 141 aa19.56■□□□□ 0.72
PTPN4-208ENST00000460289 SOX14O95416 240 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 IFNGP01579 166 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 RAC2P15153 192 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 IL2RGP31785 369 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 DBPQ10586 325 aaPredicted RBP19.55■□□□□ 0.72
PTPN4-208ENST00000460289 LINC00346Q8IVM7 164 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 NIPSNAP1Q9BPW8 284 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 POFUT1Q9H488 388 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 MSL2Q9HCI7 577 aa19.55■□□□□ 0.72
PTPN4-208ENST00000460289 MRPL22Q9NWU5 206 aaKnown RBP19.55■□□□□ 0.72
PTPN4-208ENST00000460289 GSC2O15499 205 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 CD55P08174 381 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 PYCR1P32322 319 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 RASSF2P50749 326 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 BNIP1Q12981 228 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 CDK5R2Q13319 367 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 OR4Q3Q8NH05 313 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 CLDND2Q8NHS1 167 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 TEX47Q8TBZ9 253 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 TIMD4Q96H15 378 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 ATF6BQ99941 703 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 RBM4Q9BWF3 364 aaKnown RBP19.54■□□□□ 0.72
PTPN4-208ENST00000460289 ARMC1Q9NVT9 282 aa19.54■□□□□ 0.72
PTPN4-208ENST00000460289 PDP1Q9P0J1 537 aaPredicted RBP19.54■□□□□ 0.72
PTPN4-208ENST00000460289 RIIAD1A6NNX1 92 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 CLDN25C9JDP6 229 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 H3BN98 237 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 E2F6O75461 281 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 FAM157CP0CG43 387 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 TNFSF4P23510 183 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 IGFBP5P24593 272 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 FMO3P31513 532 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 SLC25A1P53007 311 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 CDH15P55291 814 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 SLC3A1Q07837 685 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 CCNIQ14094 377 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 FBXW12Q6X9E4 464 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 CFAP77Q6ZQR2 320 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 CCL17Q92583 94 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 NARFLQ9H6Q4 476 aa19.53■□□□□ 0.72
PTPN4-208ENST00000460289 TCRBV3S1A0A5B6 114 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 KIAA1324LA8MWY0 1029 aaPredicted RBP19.52■□□□□ 0.72
PTPN4-208ENST00000460289 B4DSR2 109 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 F5H5K5 113 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 ATP5HO75947 161 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 HNF1AP20823 631 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 BLVRAP53004 296 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 CBX1P83916 185 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 TNFAIP6P98066 277 aaPredicted RBP19.52■□□□□ 0.72
PTPN4-208ENST00000460289 CRMP1Q14194 572 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 RSPO1Q2MKA7 263 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms