RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 TSPAN13O95857 204 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 CRYGBP07316 175 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 IVLP07476 585 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 TNNI1P19237 187 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 MSNP26038 577 aaKnown RBP3.42□□□□□ -1.86
CKAP2-204ENST00000459902 HOXA6P31267 233 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 VBP1P61758 197 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 SLC25A11Q02978 314 aaKnown RBP3.42□□□□□ -1.86
CKAP2-204ENST00000459902 CLHC1Q8NHS4 586 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 KCNG3Q8TAE7 436 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 RBMXL1Q96E39 390 aaKnown RBP3.42□□□□□ -1.86
CKAP2-204ENST00000459902 CCDC126Q96EE4 140 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 LRRC19Q9H756 370 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 RAB20Q9NX57 234 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 SLC39A1Q9NY26 324 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 DDX19BQ9UMR2 479 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 GOLT1BQ9Y3E0 138 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 TIMM22Q9Y584 194 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 TMEM14AQ9Y6G1 99 aa3.42□□□□□ -1.86
CKAP2-204ENST00000459902 PLA2R1Q13018 1463 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 SERTM2A0A1B0GWG4 89 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 HEATR9A2RTY3 570 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 FAM47DPA6NHR8 397 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 SERPINE3A8MV23 424 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 H0Y8G0 127 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 GOLGA8MH3BSY2 632 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 K7ERQ8 282 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 RBFOX2O43251 390 aaKnown RBP eCLIP3.41□□□□□ -1.86
CKAP2-204ENST00000459902 FOXH1O75593 365 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 OTCP00480 354 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 STAG3L3P0CL85 134 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 KDSRQ06136 332 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 XKR4Q5GH76 650 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 LIN9Q5TKA1 542 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 TWF2Q6IBS0 349 aaKnown RBP3.41□□□□□ -1.86
CKAP2-204ENST00000459902 METAP1DQ6UB28 335 aaPredicted RBP3.41□□□□□ -1.86
CKAP2-204ENST00000459902 PLET1Q6UQ28 207 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 FBXW12Q6X9E4 464 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 ZNF502Q8TBZ5 544 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 SLC7A13Q8TCU3 470 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 SLC2A14Q8TDB8 520 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 SNF8Q96H20 258 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 ZNF578Q96N58 590 aaPredicted RBP3.41□□□□□ -1.86
CKAP2-204ENST00000459902 RTBDNQ9BSG5 229 aaPredicted RBP3.41□□□□□ -1.86
CKAP2-204ENST00000459902 SAV1Q9H4B6 383 aaPredicted RBP3.41□□□□□ -1.86
CKAP2-204ENST00000459902 SPACA1Q9HBV2 294 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 CFL2Q9Y281 166 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 ADAMTS13Q76LX8 1427 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 MAPK8IP3Q9UPT6 1336 aa3.41□□□□□ -1.86
CKAP2-204ENST00000459902 ROCK1Q13464 1354 aa3.4□□□□□ -1.86
CKAP2-204ENST00000459902 GLYATL1P3A0A0U1RQE8 302 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 LSM1O15116 133 aaKnown RBP3.4□□□□□ -1.87
CKAP2-204ENST00000459902 ZNF207O43670 478 aaKnown RBP3.4□□□□□ -1.87
CKAP2-204ENST00000459902 CCNB1P14635 433 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 RAB3BP20337 219 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 BCL2A1Q16548 175 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 HSP90AA4PQ58FG1 418 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 PRMT9Q6P2P2 845 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 SHISA6Q6ZSJ9 500 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 TMCO2Q7Z6W1 182 aaPredicted RBP3.4□□□□□ -1.87
CKAP2-204ENST00000459902 HMGN2P46Q86SG4 172 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 SYCE1Q8N0S2 351 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 ZNF461Q8TAF7 563 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 ZNF721Q8TF20 911 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 ESR2Q92731 530 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 NEURL3Q96EH8 262 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 DUS3LQ96G46 650 aaKnown RBP3.4□□□□□ -1.87
CKAP2-204ENST00000459902 LINC00477Q96M19 166 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 PLIN2Q99541 437 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 CTRCQ99895 268 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 PKIBQ9C010 78 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 HMGXB4Q9UGU5 601 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 GGA2Q9UJY4 613 aa3.4□□□□□ -1.87
CKAP2-204ENST00000459902 PLEKHG2Q9H7P9 1386 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 TNS2Q63HR2 1409 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 LOC100506127A0A0U1RQW1 187 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 TMEM223A0PJW6 202 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 OR5K4A6NMS3 321 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 RAB29O14966 203 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 RAD51BO15315 384 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 RBBP9O75884 186 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 ATP5HO75947 161 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 GLAP06280 429 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 LINC00869P0C866 280 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 OR5H8P0DN80 308 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 IDO1P14902 403 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 TCN2P20062 427 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 U2AF2P26368 475 aaKnown RBP eCLIP3.39□□□□□ -1.87
CKAP2-204ENST00000459902 CBX5P45973 191 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 TUFMP49411 452 aaKnown RBP3.39□□□□□ -1.87
CKAP2-204ENST00000459902 TMED10P49755 219 aaKnown RBP3.39□□□□□ -1.87
CKAP2-204ENST00000459902 ATP5IP56385 69 aaPredicted RBP3.39□□□□□ -1.87
CKAP2-204ENST00000459902 LIPEQ05469 1076 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 FAM78AQ5JUQ0 283 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 THEM4Q5T1C6 240 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 TMEM53Q6P2H8 277 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 ZNF880Q6PDB4 577 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 DEGS2Q6QHC5 323 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 FAM228AQ86W67 206 aa3.39□□□□□ -1.87
CKAP2-204ENST00000459902 FAM81AQ8TBF8 368 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms