RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SDR9C7Q8NEX9 313 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 SLC7A6Q92536 515 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 ELMOD3Q96FG2 381 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 COQ7Q99807 217 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 EGLN1Q9GZT9 426 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 U3KQV3 271 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 ATRQ13535 2644 aa13.72□□□□□ -0.21
COL7A1-203ENST00000459756 ZSCAN5BA6NJL1 495 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 SPRY3O43610 288 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 TIMM8AO60220 97 aaPredicted RBP13.71□□□□□ -0.21
COL7A1-203ENST00000459756 TFP02787 698 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 HOXB6P17509 224 aaKnown RBP13.71□□□□□ -0.21
COL7A1-203ENST00000459756 CDH15P55291 814 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 PPP1R8Q12972 351 aaKnown RBP13.71□□□□□ -0.21
COL7A1-203ENST00000459756 CCNIQ14094 377 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 HFEQ30201 348 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 FAM120AOSQ5T036 256 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 USP51Q70EK9 711 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 OR5L1Q8NGL2 311 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 CLDND2Q8NHS1 167 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 CDADC1Q9BWV3 514 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 DGCR6LQ9BY27 220 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 FN3KQ9H479 309 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 TBC1D23Q9NUY8 699 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 VNN3Q9NY84 501 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 BAIAP2Q9UQB8 552 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 POMPQ9Y244 141 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 STARD10Q9Y365 291 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 SVEP1Q4LDE5 3571 aa13.71□□□□□ -0.21
COL7A1-203ENST00000459756 AQP12BA6NM10 295 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 B4DSR2 109 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 HLA-DQA2P01906 255 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 CD55P08174 381 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 DBHP09172 617 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 HNF1AP20823 631 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 KITLGP21583 273 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 ECH1Q13011 328 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 SLC18B1Q6NT16 456 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 CORO6Q6QEF8 472 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 AQP12AQ8IXF9 295 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 ADGRG5Q8IZF4 528 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 LNX2Q8N448 690 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 OR8D4Q8NGM9 314 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 OR2AJ1Q8NGZ0 328 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 OR2T4Q8NH00 348 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 PTP4A1Q93096 173 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 APOBEC3DQ96AK3 386 aaPredicted RBP13.7□□□□□ -0.22
COL7A1-203ENST00000459756 HAVCR1Q96D42 359 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 CMBLQ96DG6 245 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 DDOQ99489 341 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 CHID1Q9BWS9 393 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 PLA2G12AQ9BZM1 189 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 POFUT1Q9H488 388 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 NARFLQ9H6Q4 476 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 MSL2Q9HCI7 577 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 CYB5R1Q9UHQ9 305 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 KCNG2Q9UJ96 466 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 PURGQ9UJV8 347 aaKnown RBP13.7□□□□□ -0.22
COL7A1-203ENST00000459756 CUBNO60494 3623 aa13.7□□□□□ -0.22
COL7A1-203ENST00000459756 FBN1P35555 2871 aaKnown RBP13.69□□□□□ -0.22
COL7A1-203ENST00000459756 DHRS12A0PJE2 317 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 CLDN25C9JDP6 229 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 RAC2P15153 192 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 GGT2P36268 569 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 DVL1P1P54792 670 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-203ENST00000459756 DBPQ10586 325 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-203ENST00000459756 CDK5R2Q13319 367 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 ZNF362Q5T0B9 420 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-203ENST00000459756 C1orf146Q5VVC0 180 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 CD300LDQ6UXZ3 194 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 CYB561A3Q8NBI2 242 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 PROKR2Q8NFJ6 384 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 OR2T33Q8NG76 320 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 OR10G2Q8NGC3 310 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 TIMD4Q96H15 378 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 PITX2Q99697 317 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 TSSK6Q9BXA6 273 aa13.69□□□□□ -0.22
COL7A1-203ENST00000459756 MXRA5Q9NR99 2828 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 ARRDC5A6NEK1 342 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 WNT9BO14905 357 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 CIB2O75838 187 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 CST1P01037 141 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 ZNF823P16415 610 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 SRD5A1P18405 259 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 PCMT1P22061 227 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 TNFSF4P23510 183 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 LMO4P61968 165 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 SLC3A1Q07837 685 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 CR1LQ2VPA4 569 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 KRTAP27-1Q3LI81 207 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 FBXW12Q6X9E4 464 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 CFAP77Q6ZQR2 320 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 LINC00346Q8IVM7 164 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 SLC37A3Q8NCC5 494 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 CANT1Q8WVQ1 401 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 CCL17Q92583 94 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 RAB1CQ92928 201 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 ATF6BQ99941 703 aa13.68□□□□□ -0.22
COL7A1-203ENST00000459756 MRPL22Q9NWU5 206 aaKnown RBP13.68□□□□□ -0.22
COL7A1-203ENST00000459756 TREM2Q9NZC2 230 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms