RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ODF4Q2M2E3 257 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 ZCCHC14Q8WYQ9 949 aaKnown RBP21.43■■□□□ 1.02
U2AF1-204ENST00000459639 AP3S1Q92572 193 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 HDHD2Q9H0R4 259 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 PLEKHB1Q9UF11 243 aaPredicted RBP21.43■■□□□ 1.02
U2AF1-204ENST00000459639 NUFIP1Q9UHK0 495 aaKnown RBP21.43■■□□□ 1.02
U2AF1-204ENST00000459639 SLC5A6Q9Y289 635 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 PEX16Q9Y5Y5 336 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 IGF2RP11717 2491 aa21.43■■□□□ 1.02
U2AF1-204ENST00000459639 GTF3C1Q12789 2109 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 MGAQ8IWI9 3026 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 DMXL2Q8TDJ6 3036 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 PIN1P1O15428 100 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 GABRA1P14867 456 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 ACHEP22303 614 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 FAPQ12884 760 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 FBXW9Q5XUX1 488 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF585AQ6P3V2 769 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 FAM214BQ7L5A3 538 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 SLC16A14Q7RTX9 510 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 RDH10Q8IZV5 341 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 OR10AC1Q8NH08 325 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 PPP1R14AQ96A00 147 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 KCNS3Q9BQ31 491 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 SMURF1Q9HCE7 757 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 PLEK2Q9NYT0 353 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 PRSS50Q9UI38 385 aa21.42■■□□□ 1.02
U2AF1-204ENST00000459639 A0A1W2PPK0 400 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 SMIM30A4D0T7 59 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 SGCEO43556 437 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 RAF1P04049 648 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 CFL1P23528 166 aaKnown RBP21.41■■□□□ 1.02
U2AF1-204ENST00000459639 PTGER4P35408 488 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 CX3CR1P49238 355 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 BMXP51813 675 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 TMEM244Q5VVB8 128 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 SKA3Q8IX90 412 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 ELMOD2Q8IZ81 293 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 C9orf106Q8NAJ2 232 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 TSEN15Q8WW01 171 aaKnown RBP21.41■■□□□ 1.02
U2AF1-204ENST00000459639 S100ZQ8WXG8 99 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 PBOV1Q9GZY1 135 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 TIMM10BQ9Y5J6 103 aa21.41■■□□□ 1.02
U2AF1-204ENST00000459639 TRBV5-7A0A0A0MS05 114 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 WDR1O75083 606 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF32P17041 273 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 OTX1P32242 354 aaPredicted RBP21.4■■□□□ 1.02
U2AF1-204ENST00000459639 S100A5P33763 92 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 PRKXP51817 358 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 ECH1Q13011 328 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 CROCCP3Q8IVE0 287 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 OR51A4Q8NGJ6 313 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 AKIP1Q9NQ31 210 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 HHLA2Q9UM44 414 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 MBD3L4A6NDZ8 208 aaPredicted RBP21.4■■□□□ 1.02
U2AF1-204ENST00000459639 MBD3L3A6NE82 208 aaPredicted RBP21.4■■□□□ 1.02
U2AF1-204ENST00000459639 MBD3L5A6NJ08 208 aaPredicted RBP21.4■■□□□ 1.02
U2AF1-204ENST00000459639 APOC1P02654 83 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 TTRP02766 147 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 MAGEB1P43366 347 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 SOX2P48431 317 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 CAV3P56539 151 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF121P58317 390 aaPredicted RBP21.4■■□□□ 1.02
U2AF1-204ENST00000459639 GCNT2Q8N0V5 402 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 ZNF283Q8N7M2 679 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 MBD3L2Q8NHZ7 208 aaPredicted RBP21.4■■□□□ 1.02
U2AF1-204ENST00000459639 TMEM106AQ96A25 262 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 BRD7Q9NPI1 651 aa21.4■■□□□ 1.02
U2AF1-204ENST00000459639 LOC107986453A0A1B0GWG9 222 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 SYNGR3O43761 229 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 DOK2O60496 412 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 NCR1O76036 304 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 SRMP19623 302 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 RAB3BP20337 219 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 MPGP29372 298 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 TDGF1P3P51864 188 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 FOXG1P55316 489 aaPredicted RBP21.39■■□□□ 1.01
U2AF1-204ENST00000459639 TFAP2EQ6VUC0 442 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 NR2C2APQ86WQ0 139 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 OR6K3Q8NGY3 331 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 OR2H1Q9GZK4 316 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 HMG20AQ9NP66 347 aa21.39■■□□□ 1.01
U2AF1-204ENST00000459639 FIGNL2A6NMB9 653 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 CLDN25C9JDP6 229 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 TPOP07202 933 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 MMP7P09237 267 aaPredicted RBP21.38■■□□□ 1.01
U2AF1-204ENST00000459639 GALK2Q01415 458 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 SLC36A2Q495M3 483 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 C9orf135Q5VTT2 229 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 SPTSSAQ969W0 71 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 WDR12Q9GZL7 423 aaKnown RBP21.38■■□□□ 1.01
U2AF1-204ENST00000459639 SLITRK2Q9H156 845 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 SLC24A3Q9HC58 644 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 DHDHQ9UQ10 334 aa21.38■■□□□ 1.01
U2AF1-204ENST00000459639 A0A0G2JK05 382 aa21.37■■□□□ 1.01
U2AF1-204ENST00000459639 OR6C6A6NF89 314 aa21.37■■□□□ 1.01
U2AF1-204ENST00000459639 PDCD5O14737 125 aa21.37■■□□□ 1.01
U2AF1-204ENST00000459639 ACSM4P0C7M7 580 aa21.37■■□□□ 1.01
U2AF1-204ENST00000459639 CRYGSP22914 178 aa21.37■■□□□ 1.01
U2AF1-204ENST00000459639 PSG4Q00888 419 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms