RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 IL20Q9NYY1 176 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 STARD10Q9Y365 291 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 ANK3Q12955 4377 aaKnown RBP13.81□□□□□ -0.2
CPSF6-203ENST00000456847 TANC2Q9HCD6 1990 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 DHRS12A0PJE2 317 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 CLDN25C9JDP6 229 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 ACOT8O14734 319 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 FAM157CP0CG43 387 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 ZNF823P16415 610 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 TUBG1P23258 451 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 PYCR1P32322 319 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 CRYBB2P43320 205 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 RGS6P49758 472 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 MVKQ03426 396 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 COX10Q12887 443 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 PSG7Q13046 419 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 HFEQ30201 348 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 AVPI1Q5T686 147 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 ADGRG5Q8IZF4 528 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 OR2T4Q8NH00 348 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 DIRC2Q96SL1 478 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 PITX2Q99697 317 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 CHID1Q9BWS9 393 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 TUBG2Q9NRH3 451 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 ARMC1Q9NVT9 282 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 PTTG3PQ9NZH4 202 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 PURGQ9UJV8 347 aaKnown RBP13.8□□□□□ -0.2
CPSF6-203ENST00000456847 ZDHHC8Q9ULC8 765 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.8□□□□□ -0.22e-7■■■■□ 22.4
CPSF6-203ENST00000456847 AQP12BA6NM10 295 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 TFP02787 698 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 CDH15P55291 814 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 FLOT2Q14254 428 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 SPATA24Q86W54 205 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 AQP12AQ8IXF9 295 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 OR5L1Q8NGL2 311 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 CMBLQ96DG6 245 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 DGCR6LQ9BY27 220 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 KLHL21Q9UJP4 597 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 BAIAP2Q9UQB8 552 aa13.8□□□□□ -0.2
CPSF6-203ENST00000456847 TNFSF4P23510 183 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 HIST1H3AP68431 136 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 TNFAIP6P98066 277 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-203ENST00000456847 GK3PQ14409 553 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 FAM120AOSQ5T036 256 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 HIST2H3PS2Q5TEC6 136 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 SLC18B1Q6NT16 456 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 CFAP77Q6ZQR2 320 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 HIST2H3AQ71DI3 136 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 SLC37A3Q8NCC5 494 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 OR2T33Q8NG76 320 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 OR9Q1Q8NGQ5 310 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 TEX47Q8TBZ9 253 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 GIPC3Q8TF64 312 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 APOBEC3DQ96AK3 386 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-203ENST00000456847 TIMD4Q96H15 378 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 TREM2Q9NZC2 230 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 CACNG2Q9Y698 323 aa13.79□□□□□ -0.2
CPSF6-203ENST00000456847 J3QW42 95 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 IFNGP01579 166 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 SRD5A1P18405 259 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 CR1LQ2VPA4 569 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 LNX2Q8N448 690 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 OR4Q3Q8NH05 313 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 CANT1Q8WVQ1 401 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 CCL17Q92583 94 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 PTP4A1Q93096 173 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 ATF6BQ99941 703 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 KCNG2Q9UJ96 466 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 TVP23AA6NH52 213 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 H3BN98 237 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 WNT9BO14905 357 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 E2F6O75461 281 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 ADH4P08319 380 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 KITLGP21583 273 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 CRMP1Q14194 572 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 OR5AS1Q8N127 324 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 OR2Z1Q8NG97 314 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 OR51L1Q8NGJ5 315 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 RAB1CQ92928 201 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 NIPSNAP1Q9BPW8 284 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 LPAR2Q9HBW0 351 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 MRPL22Q9NWU5 206 aaKnown RBP13.78□□□□□ -0.2
CPSF6-203ENST00000456847 CYB5R1Q9UHQ9 305 aa13.78□□□□□ -0.2
CPSF6-203ENST00000456847 JMJD1CQ15652 2540 aa13.77□□□□□ -0.2
CPSF6-203ENST00000456847 RIIAD1A6NNX1 92 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 B4DSR2 109 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 F5H5K5 113 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 DNAJC8O75937 253 aaPredicted RBP13.77□□□□□ -0.21
CPSF6-203ENST00000456847 HOXB6P17509 224 aaKnown RBP13.77□□□□□ -0.21
CPSF6-203ENST00000456847 SLC3A1Q07837 685 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 ECH1Q13011 328 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 HLXQ14774 488 aaPredicted RBP13.77□□□□□ -0.21
CPSF6-203ENST00000456847 GLCCI1Q86VQ1 547 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 HAVCR1Q96D42 359 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 FEVQ99581 238 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 YY1AP1Q9H869 796 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 WIPI2Q9Y4P8 454 aa13.77□□□□□ -0.21
CPSF6-203ENST00000456847 ISPDA4D126 451 aa13.76□□□□□ -0.21
CPSF6-203ENST00000456847 CD55P08174 381 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms