RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TBC1D3Q8IZP1 549 aaPredicted RBP9.25□□□□□ -0.93
CLIP4-208ENST00000456385 ZDHHC22Q8N966 263 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 OR8U1Q8NH10 309 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 WFIKKN2Q8TEU8 576 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 AQP3Q92482 292 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 PMM1Q92871 262 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 RELTQ969Z4 430 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 ANKRD9Q96BM1 317 aaPredicted RBP9.25□□□□□ -0.93
CLIP4-208ENST00000456385 RSPRY1Q96DX4 576 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 KLHDC3Q9BQ90 382 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 HDAC8Q9BY41 377 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 NMES1Q9C002 83 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 CKLFQ9UBR5 152 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 TBC1D29Q9UFV1 150 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 RAB27BO00194 218 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 MFNGO00587 321 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 GMFGO60234 142 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 OR10H2O60403 315 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 KLK3P07288 261 aaPredicted RBP9.25□□□□□ -0.93
CLIP4-208ENST00000456385 PVRP15151 417 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 GNB3P16520 340 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 S1PR1P21453 382 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 CCR4P51679 360 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 EGR4Q05215 589 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 SLC9A3R2Q15599 337 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF260Q3ZCT1 412 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 AWAT1Q58HT5 328 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 EEF1A1P5Q5VTE0 462 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 TMEM244Q5VVB8 128 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 TMEM184AQ6ZMB5 413 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 VWCEQ96DN2 955 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 KTI12Q96EK9 354 aaPredicted RBP9.25□□□□□ -0.93
CLIP4-208ENST00000456385 HHIPL1Q96JK4 782 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 OR8B4Q96RC9 309 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF587Q96SQ5 575 aaPredicted RBP9.25□□□□□ -0.93
CLIP4-208ENST00000456385 TCEAL7Q9BRU2 100 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 TIMM29Q9BSF4 260 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 GGACTQ9BVM4 153 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 MMP25Q9NPA2 562 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 SLC2A4RGQ9NR83 387 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 ASH2LQ9UBL3 628 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 TIMM10BQ9Y5J6 103 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 WIF1Q9Y5W5 379 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 CACNA1IQ9P0X4 2223 aa9.25□□□□□ -0.93
CLIP4-208ENST00000456385 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 SOX1O00570 391 aaPredicted RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 PPIHO43447 177 aaKnown RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 OIP5O43482 229 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 ARG1P05089 322 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 IGFBP3P17936 291 aaPredicted RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 EIF2S3P41091 472 aaKnown RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 SLC6A9P48067 706 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF141Q15928 474 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 AGBL4Q5VU57 503 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 CDPF1Q6NVV7 123 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 CBLN3Q6UW01 205 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 BTNL8Q6UX41 500 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 MARCH3Q86UD3 253 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 FOXRED2Q8IWF2 684 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 WDSUB1Q8N9V3 476 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 OR2I1PQ8NGU4 316 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 OR10G6Q8NH81 332 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 SAT2Q96F10 170 aaPredicted RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 SLC5A7Q9GZV3 580 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 SRMSQ9H3Y6 488 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 TAF9BQ9HBM6 251 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 PHPT1Q9NRX4 125 aaPredicted RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 GDE1Q9NZC3 331 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF107Q9UII5 783 aaPredicted RBP9.24□□□□□ -0.93
CLIP4-208ENST00000456385 TMEM14AQ9Y6G1 99 aa9.24□□□□□ -0.93
CLIP4-208ENST00000456385 SERINC4A6NH21 518 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 PRR19A6NJB7 356 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 C11orf98E9PRG8 122 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 NPIPB9F8W1W9 429 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 H0YGG7 62 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 ADH1AP07327 375 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 SPARCP09486 303 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 ASAH2BP0C7U1 165 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 RAB5AP20339 215 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 LAP3P28838 519 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 CX3CR1P49238 355 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 ARF3P61204 181 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 RAB32Q13637 225 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 ZNHIT3Q15649 155 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 TEX30Q5JUR7 227 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 FAHD2BQ6P2I3 314 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 GRASPQ7Z6J2 395 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF679Q8IYX0 411 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 FRMD1Q8N878 549 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 FLVCR1-AS1Q8TAF5 88 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 TCTEX1D2Q8WW35 142 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 FAHD2AQ96GK7 314 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 OR10C1Q96KK4 312 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 PFDN5Q99471 154 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 MAP3K3Q99759 626 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 CHRDQ9H2X0 955 aa9.23□□□□□ -0.93
CLIP4-208ENST00000456385 KIR3DX1Q9H7L2 352 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms