RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF879B4DU55 563 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TGFBR3LH3BV60 316 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF354AO60765 605 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 C8GP07360 202 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 DCNP07585 359 aaKnown RBP4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 GTF2F2P13984 249 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 PPICP45877 212 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CDX1P47902 265 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 RASGEF1BQ0VAM2 473 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 MGAT2Q10469 447 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 NNATQ16517 81 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CTXN3Q4LDR2 81 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 BAIAP2L2Q6UXY1 529 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 VN1R4Q7Z5H5 301 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CSNK1A1LQ8N752 337 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 OR6K6Q8NGW6 343 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2G2Q8NGZ5 317 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ST7LQ8TDW4 575 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 RNF128Q8TEB7 428 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM171Q8WVE6 324 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 MAFIPQ8WZ33 124 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 BBS4Q96RK4 519 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 SGIP1Q9BQI5 828 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ADAM19Q9H013 955 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 FBXO44Q9H4M3 255 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 SLCO1B1Q9Y6L6 691 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 IGKV1D-42A0A075B6H8 117 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 A0A0A6YYD4 124 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 LOC390937A0A1W2PQ73 354 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 BTBD17A6NE02 478 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF860A6NHJ4 632 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 C5orf58C9J3I9 102 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 C3orf80F5H4A9 247 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 H0YIG0 161 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 EFEMP2O95967 443 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 JMJD7P0C870 316 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 UBBP0CG47 229 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 PRKAR2AP13861 404 aaKnown RBP4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 IFNGR2P38484 337 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 GSK3AP49840 483 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 NRG3P56975 720 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 RGS8P57771 180 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 RBX1P62877 108 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CSNK1G2P78368 415 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 MESTQ5EB52 335 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 MZT2AQ6P582 158 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ADIPOR2Q86V24 386 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 EXD3Q8N9H8 876 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 DCAF4L2Q8NA75 395 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 OR5T3Q8NGG3 340 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 GRHL3Q8TE85 626 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 OR5P2Q8WZ92 322 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC25A36Q96CQ1 311 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 RAB3CQ96E17 227 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CMTM3Q96MX0 182 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 INTS14Q96SY0 518 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TMPRSS5Q9H3S3 457 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 RPS10P5Q9NQ39 176 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CREBZFQ9NS37 354 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 SEMA5BQ9P283 1151 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF319Q9P2F9 582 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 POLQO75417 2590 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 DCDC2BA2VCK2 349 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF724A8MTY0 619 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 RBBP9O75884 186 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 SERPINF1P36955 418 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 DLSTP36957 453 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 PMELP40967 661 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CD200P41217 278 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TAS2R41P59536 307 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 AP3S2P59780 193 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 NUTF2P61970 127 aaKnown RBP4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 HTRA3P83110 453 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 DEFA6Q01524 100 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ACY1Q03154 408 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 EGR4Q05215 589 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 GRB14Q14449 540 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 ALG11Q2TAA5 492 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 WDR38Q5JTN6 314 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 NSUN5P2Q63ZY6 315 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CDC73Q6P1J9 531 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 C11orf88Q6PI97 169 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC39A5Q6ZMH5 540 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 BPIFB2Q8N4F0 458 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 PIGXQ8TBF5 258 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CYB5D2Q8WUJ1 264 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM239Q8WW34 195 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 C2orf88Q9BSF0 95 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 NICN1Q9BSH3 213 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 C1QTNF2Q9BXJ5 285 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CHMP1AQ9HD42 196 aaPredicted RBP4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 HAO2Q9NYQ3 351 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 GNG8Q9UK08 70 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 CA14Q9ULX7 337 aa4.05□□□□□ -1.76
DEPDC1-202ENST00000456315 A0A0A6YYD5 115 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 TGIF2-C20orf24A0A0A6YYL0 155 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 CDRT15L2A8MXV6 281 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 ACOT7O00154 380 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 SDCBPO00560 298 aaPredicted RBP4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 IFNA2P01563 188 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms