RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 HEATR5AQ86XA9 2040 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 OR14C36Q8NHC7 312 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 PHOSPHO1Q8TCT1 267 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 KTI12Q96EK9 354 aaPredicted RBP12.31□□□□□ -0.44
PTPRE-204ENST00000455661 ZC3H10Q96K80 434 aaKnown RBP12.31□□□□□ -0.44
PTPRE-204ENST00000455661 FOXN4Q96NZ1 517 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 ELF4Q99607 663 aaPredicted RBP12.31□□□□□ -0.44
PTPRE-204ENST00000455661 CCDC3Q9BQI4 270 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 SEBOXQ9HB31 216 aaPredicted RBP12.31□□□□□ -0.44
PTPRE-204ENST00000455661 ASH2LQ9UBL3 628 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 TBC1D3DA0A087WVF3 549 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 TBC1D3LB9A6J9 549 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 H0YIZ8 118 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 MT-ND4LP03901 98 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 CD5P06127 495 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 TBC1D3HP0C7X1 549 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 PVRP15151 417 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF44P15621 663 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 CPT2P23786 658 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 BIKQ13323 160 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 TMEM128Q5BJH2 165 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 TBC1D3CQ6IPX1 549 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 C5orf46Q6UWT4 87 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 TBC1D3Q8IZP1 549 aaPredicted RBP12.3□□□□□ -0.44
PTPRE-204ENST00000455661 DTWD2Q8NBA8 298 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF563Q8TA94 476 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 BAHD1Q8TBE0 780 aaPredicted RBP12.3□□□□□ -0.44
PTPRE-204ENST00000455661 MARCH1Q8TCQ1 289 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 HIST1H2BAQ96A08 127 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 AQP10Q96PS8 301 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 STARD5Q9NSY2 213 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
PTPRE-204ENST00000455661 MIOXQ9UGB7 285 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 TINAGQ9UJW2 476 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 RPH3AQ9Y2J0 694 aaPredicted RBP12.3□□□□□ -0.44
PTPRE-204ENST00000455661 KPTNQ9Y664 436 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 POMT1Q9Y6A1 747 aa12.3□□□□□ -0.44
PTPRE-204ENST00000455661 RAB27BO00194 218 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 FBXO24O75426 580 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 SCGNO76038 276 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 PET100P0DJ07 73 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF14P17017 642 aaPredicted RBP12.29□□□□□ -0.44
PTPRE-204ENST00000455661 CD80P33681 288 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 ACTR1BP42025 376 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 DVL1P1P54792 670 aaPredicted RBP12.29□□□□□ -0.44
PTPRE-204ENST00000455661 ACTR1AP61163 376 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 FABP9Q0Z7S8 132 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPRE-204ENST00000455661 TMEM244Q5VVB8 128 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF600Q6ZNG1 722 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 SLC29A4Q7RTT9 530 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 NUP54Q7Z3B4 507 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 MDGA2Q7Z553 956 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 OR4D6Q8NGJ1 314 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 METTL21AQ8WXB1 218 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 DGAT2Q96PD7 388 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 RAB18Q9NP72 206 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 LOC390937A0A1W2PQ73 354 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 MSGN1A6NI15 193 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 C11orf98E9PRG8 122 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 TAAR5O14804 337 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 TO15178 435 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 SLC31A1O15431 190 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 SLC16A7O60669 478 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 APBB3O95704 486 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 PMP2P02689 132 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 LYL1P12980 280 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF704Q6ZNC4 412 aaPredicted RBP12.29□□□□□ -0.44
PTPRE-204ENST00000455661 TMPPEQ6ZT21 453 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 HOGA1Q86XE5 327 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 NUBPLQ8TB37 319 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 TCTEX1D2Q8WW35 142 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 TAAR8Q969N4 342 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 CMBLQ96DG6 245 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 KIRREL1Q96J84 757 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 LAT2Q9GZY6 243 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 TAF9BQ9HBM6 251 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 LRP12Q9Y561 859 aa12.29□□□□□ -0.44
PTPRE-204ENST00000455661 C2orf74A8MZ97 194 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 GATCO43716 136 aaKnown RBP12.28□□□□□ -0.44
PTPRE-204ENST00000455661 LRP3O75074 770 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
PTPRE-204ENST00000455661 AGAP20933 346 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 ADH6P28332 368 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 LPAR6P43657 344 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 OR9A4Q8NGU2 314 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 OR4K15Q8NH41 348 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 C16orf52Q8NHV5 167 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 C8orf44Q96CB5 159 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
PTPRE-204ENST00000455661 ABHD6Q9BV23 337 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 S1PR5Q9H228 398 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 UBQLN4Q9NRR5 601 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 OR5AC2Q9NZP5 309 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 DNAJB11Q9UBS4 358 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 R4GMQ9 66 aa12.28□□□□□ -0.44
PTPRE-204ENST00000455661 MPDZO75970 2070 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms