RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NPDC1Q9NQX5 325 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 CENPMQ9NSP4 180 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 LSM2Q9Y333 95 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 LRP12Q9Y561 859 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 SNX5Q9Y5X3 404 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 METTL15A6NJ78 407 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 PSMD9O00233 223 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 MYL12BO14950 172 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 MAGEB4O15481 346 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 PTHP01270 115 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 KRT8P05787 483 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 RPSAP08865 295 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 RNF224P0DH78 156 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 PCMT1P22061 227 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 OTX1P32242 354 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 DCTDP32321 178 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 HTR5AP47898 357 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 OR12D2P58182 307 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 GRB2P62993 217 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 EMX1Q04741 257 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 PLP2Q04941 152 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 RAB39AQ14964 217 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 RSPO1Q2MKA7 263 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 C3orf36Q3SXR2 165 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 OR2G6Q5TZ20 316 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 TMPRSS11AQ6ZMR5 421 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 SPATC1Q76KD6 591 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 SVOPQ8N4V2 548 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 C4orf36Q96KX1 117 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 ISG20L2Q9H9L3 353 aaKnown RBP14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 ELOVL3Q9HB03 270 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 IKZF2Q9UKS7 526 aa14.43□□□□□ -0.1
CCDC90B-202ENST00000455220 THBDP07204 575 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 H2BFMP0C1H6 154 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 MAP2K4P45985 399 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 WNT4P56705 351 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 TP53I3Q53FA7 332 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 SPRYD4Q8WW59 207 aaPredicted RBP14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 WFIKKN1Q96NZ8 548 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 NIPAL2Q9H841 368 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 ACOT13Q9NPJ3 140 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 ACOXLQ9NUZ1 547 aa14.42□□□□□ -0.1
CCDC90B-202ENST00000455220 LRRK2Q5S007 2527 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 IQCMA0A1B0GVH7 501 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 MT-ND5P03915 603 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 APEX1P27695 318 aaKnown RBP14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 RIDAP52758 137 aaKnown RBP14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 DOC2BQ14184 412 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 LIPNQ5VXI9 398 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 FAM220AQ7Z4H9 259 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 MYPOPQ86VE0 399 aaPredicted RBP14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 RNF166Q96A37 237 aaPredicted RBP14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 PELI1Q96FA3 418 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 MS4A3Q96HJ5 214 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 POM121L2Q96KW2 1035 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 KCNJ15Q99712 375 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 NPAP1Q9NZP6 1156 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 GNG8Q9UK08 70 aa14.41□□□□□ -0.1
CCDC90B-202ENST00000455220 LOC100509620A0A075B734 347 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 J3QLW9 94 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 SRSF10O75494 262 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 CELA3BP08861 270 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 TACSTD2P09758 323 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 ZNF19P17023 458 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 STOMP27105 288 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 PEX19P40855 299 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 IDH3GP51553 393 aaPredicted RBP14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 SPHARQ15513 63 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 TAF13Q15543 124 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 XAF1Q6GPH4 301 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 YIPF7Q8N8F6 280 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 SLC30A7Q8NEW0 376 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 HAVCR2Q8TDQ0 301 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 SSC4DQ8WTU2 575 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 SLC7A6Q92536 515 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 SPTSSAQ969W0 71 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 OR5M11Q96RB7 305 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 MED18Q9BUE0 208 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 NDRG3Q9UGV2 375 aa14.4□□□□□ -0.1
CCDC90B-202ENST00000455220 IGHV1-18A0A0C4DH31 117 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 DBHP09172 617 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 CECR9P0C854 216 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 IGFBP2P18065 325 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 HSD11B1P28845 292 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 PSMA6P60900 246 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 ACSM1Q08AH1 577 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 MRPL28Q13084 256 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 UBE2UQ5VVX9 321 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 GATAD2BQ8WXI9 593 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 FCGR1BQ92637 280 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 DCLRE1CQ96SD1 692 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 C1QTNF6Q9BXI9 259 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 MRPS26Q9BYN8 205 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 BABAM2Q9NXR7 383 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 KLF2Q9Y5W3 355 aaPredicted RBP14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 HELZ2Q9BYK8 2649 aaKnown RBP14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 M0R135 149 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 LALBAP00709 142 aa14.39□□□□□ -0.11
CCDC90B-202ENST00000455220 LCKP06239 509 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms