RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 SDR9C7Q8NEX9 313 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 OR9Q2Q8NGE9 314 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 TIMD4Q96H15 378 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 MSL2Q9HCI7 577 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 RPRD1BQ9NQG5 326 aaKnown RBP10.21□□□□□ -0.77
USP40-210ENST00000454354 IL20Q9NYY1 176 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 PRPF19Q9UMS4 504 aaKnown RBP10.21□□□□□ -0.77
USP40-210ENST00000454354 POLR1DQ9Y2S0 133 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 STARD10Q9Y365 291 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 GRIP1Q9Y3R0 1128 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 WIPI2Q9Y4P8 454 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 CACNG2Q9Y698 323 aa10.21□□□□□ -0.77
USP40-210ENST00000454354 BHLHE40O14503 412 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 DYNC1I1O14576 645 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 IGHV2-5P01817 119 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 DBHP09172 617 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 RAC2P15153 192 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 NOS3P29474 1203 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 MVKQ03426 396 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP40-210ENST00000454354 SLC3A1Q07837 685 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 SLC36A3Q495N2 470 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 SLC18B1Q6NT16 456 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 FBXW12Q6X9E4 464 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 RINLQ6ZS11 566 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 RASSF6Q6ZTQ3 369 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 PHC2Q8IXK0 858 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 CCDC197Q8NCU1 140 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 OR52L1Q8NGH7 329 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 OR51F2Q8NH61 342 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 RAB1CQ92928 201 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 PTP4A1Q93096 173 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 APOBEC3DQ96AK3 386 aaPredicted RBP10.2□□□□□ -0.78
USP40-210ENST00000454354 TMEM186Q96B77 213 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 HAVCR1Q96D42 359 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 RAB39BQ96DA2 213 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 CMBLQ96DG6 245 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 PLA2G12AQ9BZM1 189 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 C1orf21Q9H246 121 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 EGLN3Q9H6Z9 239 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 SRA1Q9HD15 236 aaKnown RBP10.2□□□□□ -0.78
USP40-210ENST00000454354 HIF1ANQ9NWT6 349 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 CYB5R1Q9UHQ9 305 aa10.2□□□□□ -0.78
USP40-210ENST00000454354 TRAV20A0A0B4J274 112 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 CCNB2O95067 398 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 GGT2P36268 569 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 CENPAP49450 140 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 ERFP50548 548 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 TNFAIP6P98066 277 aaPredicted RBP10.19□□□□□ -0.78
USP40-210ENST00000454354 MS4A2Q01362 244 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 GK3PQ14409 553 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 RSPO1Q2MKA7 263 aaPredicted RBP10.19□□□□□ -0.78
USP40-210ENST00000454354 SPRNQ5BIV9 151 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 OR2T5Q6IEZ7 315 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 ACSM5Q6NUN0 579 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 CORO6Q6QEF8 472 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 CFAP77Q6ZQR2 320 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 COLCA1Q6ZS62 124 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 OR5L1Q8NGL2 311 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 OR8D4Q8NGM9 314 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 OR2T29Q8NH02 315 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 CCL17Q92583 94 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 ASB9Q96DX5 294 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 DDOQ99489 341 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 C1QTNF5Q9BXJ0 243 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 DGCR6LQ9BY27 220 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 FN3KQ9H479 309 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 PNRC2Q9NPJ4 139 aaKnown RBP10.19□□□□□ -0.78
USP40-210ENST00000454354 G6PC2Q9NQR9 355 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 MRPL22Q9NWU5 206 aaKnown RBP10.19□□□□□ -0.78
USP40-210ENST00000454354 VNN3Q9NY84 501 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 KCNG2Q9UJ96 466 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 TENM1Q9UKZ4 2725 aa10.19□□□□□ -0.78
USP40-210ENST00000454354 GASTP01350 101 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 IGHV2-70P01814 119 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 ANPEPP15144 967 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 TNFRSF1AP19438 455 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 TNFSF4P23510 183 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 DBPQ10586 325 aaPredicted RBP10.18□□□□□ -0.78
USP40-210ENST00000454354 ECH1Q13011 328 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 KRTAP24-1Q3LI83 254 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 FAM98BQ52LJ0 330 aaKnown RBP10.18□□□□□ -0.78
USP40-210ENST00000454354 CLEC12AQ5QGZ9 265 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 ZNF362Q5T0B9 420 aaPredicted RBP10.18□□□□□ -0.78
USP40-210ENST00000454354 SLC35F1Q5T1Q4 408 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.18□□□□□ -0.78
USP40-210ENST00000454354 LINC00346Q8IVM7 164 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 LNX2Q8N448 690 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 RFLNBQ8N5W9 214 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 ZNF283Q8N7M2 679 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 OR2Z1Q8NG97 314 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 OR52E2Q8NGJ4 325 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 ATF6BQ99941 703 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 LPAR2Q9HBW0 351 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 TAS2R1Q9NYW7 299 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 PTTG3PQ9NZH4 202 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 IL19Q9UHD0 177 aa10.18□□□□□ -0.78
USP40-210ENST00000454354 A0A1B0GWJ7 208 aa10.17□□□□□ -0.78
USP40-210ENST00000454354 ACOT8O14734 319 aa10.17□□□□□ -0.78
USP40-210ENST00000454354 SURF4O15260 269 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms