RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ANAPC1Q9H1A4 1944 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 TMEM150CB9EJG8 249 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 LILRB3O75022 631 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 CCL5P13501 91 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 GUCA1AP43080 201 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 KIR3DL2P43630 455 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 CAMLGP49069 296 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 B2MP61769 119 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 TGIF1Q15583 401 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 MESTQ5EB52 335 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 FAM209BQ5JX69 171 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 ANGPTL5Q86XS5 388 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 PRSS35Q8N3Z0 413 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 RSC1A1Q92681 617 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 TOMM40LQ969M1 308 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 PFDN5Q99471 154 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 CDC6Q99741 560 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 ABHD6Q9BV23 337 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 LYRM4Q9HD34 91 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 PRODH2Q9UF12 536 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 APC2O95996 2303 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 H3BML4 177 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 NME2P1O60361 137 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 LYPD3O95274 346 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 FABP9Q0Z7S8 132 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 CD226Q15762 336 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 CLEC9AQ6UXN8 241 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 RBMS3Q6XE24 437 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 OTOSQ8NHW6 89 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 PUS1Q9Y606 427 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 MRPS18BQ9Y676 258 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 PNPP00491 289 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 SLC6A9P48067 706 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 MFGE8Q08431 387 aaPredicted RBP12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 ST7LQ8TDW4 575 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 TAF9BQ9HBM6 251 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 OR52A1Q9UKL2 312 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 C14orf166Q9Y224 244 aaKnown RBP12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 RHBDD3Q9Y3P4 386 aa12.49□□□□□ -0.41
UBE2D3-210ENST00000453744 A0A0J9YY10 115 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 C17orf51A8MQB3 221 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 OR2T1O43869 369 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 IFNA21P01568 189 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 RPS10P46783 165 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 PJVKQ0ZLH3 352 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ETV3LQ6ZN32 361 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 Q6ZRG5 221 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF440Q8IYI8 595 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 SLC22A8Q8TCC7 542 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF296Q8WUU4 475 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 TCTEX1D2Q8WW35 142 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 TAAR8Q969N4 342 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 OR8B4Q96RC9 309 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ZCCHC4Q9H5U6 513 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 FN3KRPQ9HA64 309 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 RNASEK-C17orf49H0YIS7 233 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 CTSBP07858 339 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 FREM3P0C091 2139 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ID4P47928 161 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 TSC22D1Q15714 1073 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 CHRFAM7AQ494W8 412 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 UQCC3Q6UW78 93 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 SHISA6Q6ZSJ9 500 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 TMPPEQ6ZT21 453 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 OR5AP2Q8NGF4 316 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 GPR119Q8TDV5 335 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 LRFN5Q96NI6 719 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 EMC6Q9BV81 110 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 NUDT9Q9BW91 350 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 VSX1Q9NZR4 365 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 KLK13Q9UKR3 277 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 AHCTF1Q8WYP5 2266 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 UTS2O95399 124 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 HNRNPA1P09651 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 S100A2P29034 98 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 OR1D4P47884 311 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 HHEXQ03014 270 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF529Q6P280 563 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 SLCO5A1Q9H2Y9 848 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 POLE3Q9NRF9 147 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 SLC17A4Q9Y2C5 497 aa12.48□□□□□ -0.41
UBE2D3-210ENST00000453744 MPTX1A8MV57 137 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 EIF3GO75821 320 aaKnown RBP eCLIP12.47□□□□□ -0.416e-9■■■■□ 22.8
UBE2D3-210ENST00000453744 ITGB2P05107 769 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 RGS19P49795 217 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 PLCXD2Q0VAA5 305 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 GGTLC2Q14390 218 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 PGAP1Q75T13 922 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 ABHD12BQ7Z5M8 362 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF565Q8N9K5 539 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 LRP12Q9Y561 859 aa12.47□□□□□ -0.41
UBE2D3-210ENST00000453744 LMX1BO60663 402 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms