RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 H7C1C5 153 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 ERCC1P07992 297 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 SPI1P17947 270 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 EEF1B2P24534 225 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 MTNR1AP48039 350 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 LCN6P62502 163 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 DNM1P34Q6PK57 102 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 MEPCEQ7L2J0 689 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 OR9Q1Q8NGQ5 310 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 PTP4A1Q93096 173 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 MYDGFQ969H8 173 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 SLC25A44Q96H78 314 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 SIGLEC11Q96RL6 698 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 COPS4Q9BT78 406 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 MRPS26Q9BYN8 205 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 RACGAP1Q9H0H5 632 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 RAB1BQ9H0U4 201 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 SYT4Q9H2B2 425 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 ZNF442Q9H7R0 627 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 NOX3Q9HBY0 568 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 AMBNQ9NP70 447 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 MYOZ1Q9NP98 299 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 RPRD1BQ9NQG5 326 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 PAK1IP1Q9NWT1 392 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 HAO2Q9NYQ3 351 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 SLC22A23A1A5C7 686 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 TRIM64CA6NLI5 447 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 NDUFS8O00217 210 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 RGS10O43665 173 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 TRMUO75648 421 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 RAB36O95755 333 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 PGA4P0DJD7 388 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 PGA3P0DJD8 388 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 CENPAP49450 140 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 PPOXP50336 477 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 RPS7P62081 194 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 RAB40BQ12829 278 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 POU4F2Q12837 409 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 SNTB2Q13425 540 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 GGTLC2Q14390 218 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 CHRFAM7AQ494W8 412 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 KLHL12Q53G59 568 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 WDFY1Q8IWB7 410 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 GGHQ92820 318 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 RNFT2Q96EX2 444 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 MRPL13Q9BYD1 178 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 OR51V1Q9H2C8 321 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 DYNLRB1Q9NP97 96 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 B3GNT2Q9NY97 397 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 GLTPQ9NZD2 209 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 SPEF1Q9Y4P9 236 aa15.54■□□□□ 0.08
SQSTM1-204ENST00000453046 GLCEO94923 617 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 IFNA2P01563 188 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 CDK1P06493 297 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 CLUP10909 449 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 CRABP1P29762 137 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 BLVRAP53004 296 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 RAB1AP62820 205 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 RUNX1T1Q06455 604 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 KLHL22Q53GT1 634 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 CYB5R2Q6BCY4 276 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 ZNF627Q7L945 461 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 PRSS48Q7RTY5 328 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 ZBTB46Q86UZ6 589 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 PROKR2Q8NFJ6 384 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 MS4A3Q96HJ5 214 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 CMAHPQ9Y471 501 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 DNHD1Q96M86 4753 aa15.53■□□□□ 0.08
SQSTM1-204ENST00000453046 LOC390937A0A1W2PQ73 354 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 PTGES3LE9PB15 166 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 UBL3O95164 117 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 GYPBP06028 91 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 HTR1AP08908 422 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 NR4A1P22736 598 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 GSTT1P30711 240 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 NR4A2P43354 598 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 CDH15P55291 814 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 CLRN1P58418 232 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 GALK2Q01415 458 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 LINC01590Q5TEZ4 76 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 STX19Q8N4C7 294 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 SVOPQ8N4V2 548 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 SGCDQ92629 289 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 TMEM54Q969K7 222 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 NMD3Q96D46 503 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 LGALS12Q96DT0 336 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 FOXN4Q96NZ1 517 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 TEAD3Q99594 435 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 MDFIQ99750 246 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 JAM3Q9BX67 310 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 VCX3AQ9NNX9 186 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 FGF20Q9NP95 211 aaPredicted RBP15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 FBXL3Q9UKT7 428 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 DIMT1Q9UNQ2 313 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 SNX5Q9Y5X3 404 aa15.52■□□□□ 0.08
SQSTM1-204ENST00000453046 IGLV1-36A0A0B4J1U3 117 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 FARS2O95363 451 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 FADS2O95864 444 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 IGHV4-31P0DP07 118 aa15.51■□□□□ 0.07
SQSTM1-204ENST00000453046 CTLA4P16410 223 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms