RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 HNRNPA0Q13151 305 aaKnown RBP9.13□□□□□ -0.95
USP1-204ENST00000452143 KRR1Q13601 381 aaKnown RBP9.13□□□□□ -0.95
USP1-204ENST00000452143 ZNF181Q2M3W8 571 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 ZBED5Q49AG3 693 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 GPR139Q6DWJ6 353 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 LEG1Q6P5S2 330 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 PGM2L1Q6PCE3 622 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 VTCN1Q7Z7D3 282 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 ADCK1Q86TW2 530 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 GLB1L2Q8IW92 636 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
USP1-204ENST00000452143 OR8G5Q8NG78 346 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 OR52E2Q8NGJ4 325 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 OR1F12Q8NHA8 337 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 PLEKHA8Q96JA3 519 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 Q96M85 177 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 DUX5Q96PT3 197 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 GPX7Q96SL4 187 aaPredicted RBP9.13□□□□□ -0.95
USP1-204ENST00000452143 HDHD2Q9H0R4 259 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 SLITRK2Q9H156 845 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 NMNAT1Q9HAN9 279 aaPredicted RBP9.13□□□□□ -0.95
USP1-204ENST00000452143 RHCGQ9UBD6 479 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 MIOXQ9UGB7 285 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 TRAV40A0A0B4J280 105 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 SLC22A2O15244 555 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 NDUFB2O95178 105 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 WNT2P09544 360 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 IGHV4-38-2P0DP08 117 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 FUT4P22083 530 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 CD80P33681 288 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 GPR4P46093 362 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 YAP1P46937 504 aaKnown RBP9.12□□□□□ -0.95
USP1-204ENST00000452143 ERFP50548 548 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 GNB2P62879 340 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 SLC9A3R2Q15599 337 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 IFI44LQ53G44 452 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 RRM2BQ7LG56 351 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 NLRC3Q7RTR2 1065 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 KLBQ86Z14 1044 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 C1orf87Q8N0U7 546 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 OR10AD1Q8NGE0 317 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 OR13G1Q8NGZ3 307 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 APOBEC3DQ96AK3 386 aaPredicted RBP9.12□□□□□ -0.95
USP1-204ENST00000452143 DACT3Q96B18 629 aaPredicted RBP9.12□□□□□ -0.95
USP1-204ENST00000452143 NEIL1Q96FI4 390 aaPredicted RBP9.12□□□□□ -0.95
USP1-204ENST00000452143 MEGF10Q96KG7 1140 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 ZNF582Q96NG8 517 aaPredicted RBP9.12□□□□□ -0.95
USP1-204ENST00000452143 COQ7Q99807 217 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 C1QTNF5Q9BXJ0 243 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 SYT4Q9H2B2 425 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 VIPAS39Q9H9C1 493 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 NRIP3Q9NQ35 241 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 SAR1AQ9NR31 198 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 VSX1Q9NZR4 365 aaPredicted RBP9.12□□□□□ -0.95
USP1-204ENST00000452143 SNX13Q9Y5W8 968 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 CMYA5Q8N3K9 4069 aa9.12□□□□□ -0.95
USP1-204ENST00000452143 WNK1Q9H4A3 2382 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 A0A1B0GUS0 222 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 A0A1B0GWJ7 208 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 IQCF6A8MYZ5 107 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 J3KTA2 159 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 SLC16A7O60669 478 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 KHDRBS3O75525 346 aaKnown RBP9.11□□□□□ -0.95
USP1-204ENST00000452143 ZNF682O95780 498 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 SELEP16581 610 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 ZNF26P17031 533 aaPredicted RBP9.11□□□□□ -0.95
USP1-204ENST00000452143 GATA4P43694 442 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 KCNMB1Q16558 191 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 ZNF404Q494X3 552 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 CCDC92Q53HC0 331 aaPredicted RBP9.11□□□□□ -0.95
USP1-204ENST00000452143 C1orf94Q6P1W5 598 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 DNM1P34Q6PK57 102 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 HDXQ7Z353 690 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 CYP4Z1Q86W10 505 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 OR5AS1Q8N127 324 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 ATG16L2Q8NAA4 619 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 GJC3Q8NFK1 279 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 OR8B3Q8NGG8 313 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 ZNF420Q8TAQ5 688 aaPredicted RBP9.11□□□□□ -0.95
USP1-204ENST00000452143 RAB40AQ8WXH6 277 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 SLC7A6Q92536 515 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 OR8B2Q96RD0 313 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 SLC30A2Q9BRI3 323 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 TMEM165Q9HC07 324 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 SIGLEC7Q9Y286 467 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 POLR1DQ9Y2S0 133 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 MMP24Q9Y5R2 645 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 CAPN7Q9Y6W3 813 aa9.11□□□□□ -0.95
USP1-204ENST00000452143 LOC100653049A0A140TA62 436 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 A0A1W2PRQ8 180 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 CXCR6O00574 342 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 PHYHO14832 338 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 RER1O15258 196 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 MLNRO43193 412 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 KRT34O76011 436 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 CYB5R3P00387 301 aaPredicted RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 DBHP09172 617 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 RBMXP38159 391 aaKnown RBP9.1□□□□□ -0.95
USP1-204ENST00000452143 PITPNBP48739 271 aa9.1□□□□□ -0.95
USP1-204ENST00000452143 BPIFB3P59826 476 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms