RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TIMM8AO60220 97 aaPredicted RBP16.43■□□□□ 0.22
USP40-207ENST00000450940 DBHP09172 617 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 ANPEPP15144 967 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 RAC2P15153 192 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 SLC3A1Q07837 685 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 TRIM25Q14258 630 aaKnown RBP16.43■□□□□ 0.22
USP40-207ENST00000450940 MEP1BQ16820 701 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 KRTAP27-1Q3LI81 207 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 SPRNQ5BIV9 151 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 RPL13AP3Q6NVV1 102 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 FBXW12Q6X9E4 464 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 Q6ZR03 302 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 OR51F2Q8NH61 342 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 POP5Q969H6 163 aaKnown RBP16.43■□□□□ 0.22
USP40-207ENST00000450940 TIMD4Q96H15 378 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 HIF1ANQ9NWT6 349 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 IL20Q9NYY1 176 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 CDH10Q9Y6N8 788 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 TRAV20A0A0B4J274 112 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 IGHV2-5P01817 119 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 CALB2P22676 271 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 NOS3P29474 1203 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 MS4A2Q01362 244 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 SLC36A3Q495N2 470 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 ZNF362Q5T0B9 420 aaPredicted RBP16.42■□□□□ 0.22
USP40-207ENST00000450940 ACSM5Q6NUN0 579 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 COLCA1Q6ZS62 124 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 CCDC197Q8NCU1 140 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 CCL17Q92583 94 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 EGLN3Q9H6Z9 239 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 RPRD1BQ9NQG5 326 aaKnown RBP16.42■□□□□ 0.22
USP40-207ENST00000450940 POLR1DQ9Y2S0 133 aa16.42■□□□□ 0.22
USP40-207ENST00000450940 BHLHE40O14503 412 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 GASTP01350 101 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 GGT2P36268 569 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 CENPAP49450 140 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 TNFAIP6P98066 277 aaPredicted RBP16.41■□□□□ 0.22
USP40-207ENST00000450940 SLC18B1Q6NT16 456 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 CORO6Q6QEF8 472 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 RINLQ6ZS11 566 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 RASSF6Q6ZTQ3 369 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 DHFR2Q86XF0 187 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 OR9Q2Q8NGE9 314 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 OR52E2Q8NGJ4 325 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 OR5L1Q8NGL2 311 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 APOBEC3DQ96AK3 386 aaPredicted RBP16.41■□□□□ 0.22
USP40-207ENST00000450940 RAB39BQ96DA2 213 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 CYB5R1Q9UHQ9 305 aa16.41■□□□□ 0.22
USP40-207ENST00000450940 PRPF19Q9UMS4 504 aaKnown RBP16.41■□□□□ 0.22
USP40-207ENST00000450940 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP40-207ENST00000450940 DBPQ10586 325 aaPredicted RBP16.4■□□□□ 0.22
USP40-207ENST00000450940 ECH1Q13011 328 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 KRTAP24-1Q3LI83 254 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 SLC35F1Q5T1Q4 408 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 CFAP77Q6ZQR2 320 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 RFLNBQ8N5W9 214 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 SDR9C7Q8NEX9 313 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 OR52L1Q8NGH7 329 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 C1QTNF5Q9BXJ0 243 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 C1orf21Q9H246 121 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 LPAR2Q9HBW0 351 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 G6PC2Q9NQR9 355 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 MRPL22Q9NWU5 206 aaKnown RBP16.4■□□□□ 0.22
USP40-207ENST00000450940 IL19Q9UHD0 177 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 KCNG2Q9UJ96 466 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 WNK2Q9Y3S1 2297 aa16.4■□□□□ 0.22
USP40-207ENST00000450940 DYNC1I1O14576 645 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 CCNB2O95067 398 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 TNFRSF1AP19438 455 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 TNFSF4P23510 183 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 SRP14P37108 136 aaKnown RBP16.39■□□□□ 0.21
USP40-207ENST00000450940 ERFP50548 548 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 CLEC12AQ5QGZ9 265 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 OR2T5Q6IEZ7 315 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 LNX2Q8N448 690 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 ZNF283Q8N7M2 679 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 OR2Z1Q8NG97 314 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 OR8D4Q8NGM9 314 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 OR2T29Q8NH02 315 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 PLA2G12AQ9BZM1 189 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 FN3KQ9H479 309 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 PNRC2Q9NPJ4 139 aaKnown RBP16.39■□□□□ 0.21
USP40-207ENST00000450940 VNN3Q9NY84 501 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 TAS2R1Q9NYW7 299 aa16.39■□□□□ 0.21
USP40-207ENST00000450940 A0A1B0GWJ7 208 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 SURF4O15260 269 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 PLPP2O43688 288 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 HLXQ14774 488 aaPredicted RBP16.38■□□□□ 0.21
USP40-207ENST00000450940 MICAQ29983 383 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 FAM98BQ52LJ0 330 aaKnown RBP16.38■□□□□ 0.21
USP40-207ENST00000450940 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.38■□□□□ 0.21
USP40-207ENST00000450940 PEG10Q86TG7 708 aaKnown RBP16.38■□□□□ 0.21
USP40-207ENST00000450940 LINC00346Q8IVM7 164 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 OR8G5Q8NG78 346 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 OR2AJ1Q8NGZ0 328 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 ASB9Q96DX5 294 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 CDADC1Q9BWV3 514 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 DGCR6LQ9BY27 220 aa16.38■□□□□ 0.21
USP40-207ENST00000450940 TMEM106BQ9NUM4 274 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms