RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ICAM2P13598 275 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 GTF2F2P13984 249 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 CRABP1P29762 137 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 PER3P56645 1201 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 ROM1Q03395 351 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 TEX261Q6UWH6 196 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 OR13C9Q8NGT0 318 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 OR51E1Q8TCB6 317 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 NPRL2Q8WTW4 380 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 CDV3Q9UKY7 258 aaKnown RBP13.16□□□□□ -0.3
SF1-211ENST00000448404 B3GALT1Q9Y5Z6 326 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 U3KQ87 197 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 WIPF3A6NGB9 483 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 G3V3Q6 166 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 ACSM4P0C7M7 580 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 FAM122CQ6P4D5 195 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 LUZP2Q86TE4 346 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 PHYHIPQ92561 330 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 ZNF837Q96EG3 531 aaPredicted RBP13.16□□□□□ -0.3
SF1-211ENST00000448404 HYLS1Q96M11 299 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 MFRPQ9BY79 579 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 HS3ST3B1Q9Y662 390 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 LHFPL6Q9Y693 200 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 R4GMQ9 66 aa13.16□□□□□ -0.3
SF1-211ENST00000448404 CLRN1P58418 232 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 SLC22A10Q63ZE4 541 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 NLRC3Q7RTR2 1065 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 PRMT8Q9NR22 394 aaPredicted RBP13.15□□□□□ -0.3
SF1-211ENST00000448404 DLL4Q9NR61 685 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 A0A1W2PP11 408 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 CTDSPLO15194 276 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 XRCC3O43542 346 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 TTRP02766 147 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 ANXA3P12429 323 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 HTR2CP28335 458 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 ZNF81P51508 661 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 P2RY4P51582 365 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 DYRK1AQ13627 763 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 COMMD7Q86VX2 200 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 LRRC18Q8N456 261 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 GVQW1Q8N7I0 195 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 OR5L2Q8NGL0 311 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 FAM71F1Q96KD3 344 aaPredicted RBP13.15□□□□□ -0.3
SF1-211ENST00000448404 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
SF1-211ENST00000448404 GINS4Q9BRT9 223 aa13.15□□□□□ -0.3
SF1-211ENST00000448404 TINAGL1Q9GZM7 467 aaPredicted RBP13.15□□□□□ -0.3
SF1-211ENST00000448404 FARSAQ9Y285 508 aaKnown RBP13.15□□□□□ -0.3
SF1-211ENST00000448404 LINC00862A6NCI5 91 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 ACOT7O00154 380 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 SLC17A2O00624 439 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 LAMTOR5O43504 91 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 TRAF3IP2O43734 574 aaPredicted RBP13.15□□□□□ -0.31
SF1-211ENST00000448404 IL32P24001 234 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 LCN1P31025 176 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 DAP3P51398 398 aaKnown RBP13.15□□□□□ -0.31
SF1-211ENST00000448404 RAET1LQ5VY80 246 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 ANKRD16Q6P6B7 361 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.31
SF1-211ENST00000448404 GALNT16Q8N428 558 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 OR10H5Q8NGA6 315 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 OR5D18Q8NGL1 313 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 ASB17Q8WXJ9 295 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 DPCDQ9BVM2 203 aaPredicted RBP13.15□□□□□ -0.31
SF1-211ENST00000448404 CNTD2Q9H8S5 307 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 MGAT4CQ9UBM8 478 aa13.15□□□□□ -0.31
SF1-211ENST00000448404 CNOT1A5YKK6 2376 aaKnown RBP13.14□□□□□ -0.31
SF1-211ENST00000448404 TOX3O15405 576 aaPredicted RBP13.14□□□□□ -0.31
SF1-211ENST00000448404 RBBP9O75884 186 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 QDPRP09417 244 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 RFC3P40938 356 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 CLDN17P56750 224 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 ZMYND11Q15326 602 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 LGALSLQ3ZCW2 172 aaPredicted RBP13.14□□□□□ -0.31
SF1-211ENST00000448404 OLFML2AQ68BL7 652 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 RAB40AQ8WXH6 277 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 OR2M2Q96R28 347 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 SDHAF3Q9NRP4 125 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 GDF2Q9UK05 429 aaPredicted RBP13.14□□□□□ -0.31
SF1-211ENST00000448404 HHLA2Q9UM44 414 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 SULT2B1O00204 365 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 WDPCPO95876 746 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 CFDP00746 253 aaPredicted RBP13.14□□□□□ -0.31
SF1-211ENST00000448404 IGHMP01871 453 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 SULT1A3P0DMM9 295 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 SULT1A4P0DMN0 295 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 DNASE1P24855 282 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 OTX2P32243 289 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 BLVRAP53004 296 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 SGCAQ16586 387 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 OR52W1Q6IF63 320 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 ALKBH4Q9NXW9 302 aa13.14□□□□□ -0.31
SF1-211ENST00000448404 PPIEQ9UNP9 301 aaKnown RBP13.14□□□□□ -0.31
SF1-211ENST00000448404 DNAJC13O75165 2243 aa13.13□□□□□ -0.31
SF1-211ENST00000448404 LOC100289279A0A1B0GTE1 492 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms