RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PLP2Q04941 152 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 MRPL28Q13084 256 aaKnown RBP17.03■□□□□ 0.32
SGCE-207ENST00000447873 ARMCX4Q5H9R4 360 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 MDP1Q86V88 176 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 WDR31Q8NA23 367 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 OR1F12Q8NHA8 337 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 HAVCR2Q8TDQ0 301 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 NOX3Q9HBY0 568 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 OBP2BQ9NPH6 170 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 FBXL3Q9UKT7 428 aa17.03■□□□□ 0.32
SGCE-207ENST00000447873 UGT2B10P36537 528 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 HTR5AP47898 357 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 ALDH3B2P48448 385 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 GTF2A1P52655 376 aaPredicted RBP17.02■□□□□ 0.32
SGCE-207ENST00000447873 GP2P55259 537 aaKnown RBP17.02■□□□□ 0.32
SGCE-207ENST00000447873 GALK2Q01415 458 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 ACSM1Q08AH1 577 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 MLLT11Q13015 90 aaPredicted RBP17.02■□□□□ 0.32
SGCE-207ENST00000447873 TIMM23BQ5SRD1 257 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 P2RY8Q86VZ1 359 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 CPEB3Q8NE35 698 aaKnown RBP17.02■□□□□ 0.32
SGCE-207ENST00000447873 COQ7Q99807 217 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 ACTR6Q9GZN1 396 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 NIPAL2Q9H841 368 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 ISYNA1Q9NPH2 558 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 RALYQ9UKM9 306 aaKnown RBP17.02■□□□□ 0.32
SGCE-207ENST00000447873 AMDHD2Q9Y303 409 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 GRIP1Q9Y3R0 1128 aa17.02■□□□□ 0.32
SGCE-207ENST00000447873 IQCMA0A1B0GVH7 501 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 OR6C6A6NF89 314 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 E9PI62 339 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 TAS2R43P59537 309 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 BDH1Q02338 343 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 RAB39AQ14964 217 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 ZFP41Q8N8Y5 198 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 TMIGD2Q96BF3 282 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 LRRC46Q96FV0 321 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 OPALINQ96PE5 141 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 KCNJ15Q99712 375 aa17.02■□□□□ 0.31
SGCE-207ENST00000447873 USB1Q9BQ65 265 aaKnown RBP17.02■□□□□ 0.31
SGCE-207ENST00000447873 PNMA8CA0A1B0GUJ8 204 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 TMEM269A0A1B0GVZ9 245 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 F5H5K5 113 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 DCTDP32321 178 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 PRKXP51817 358 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 TSTQ16762 297 aaKnown RBP17.01■□□□□ 0.31
SGCE-207ENST00000447873 ZNF829Q3KNS6 432 aaPredicted RBP17.01■□□□□ 0.31
SGCE-207ENST00000447873 CCDC58Q4VC31 144 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 RPL22L1Q6P5R6 122 aaKnown RBP17.01■□□□□ 0.31
SGCE-207ENST00000447873 SLC7A6Q92536 515 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 UFD1Q92890 307 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 SPTSSAQ969W0 71 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 MUCL1Q96DR8 90 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 KCNJ16Q9NPI9 418 aa17.01■□□□□ 0.31
SGCE-207ENST00000447873 NKX2-6A6NCS4 301 aa17■□□□□ 0.31
SGCE-207ENST00000447873 ZG16O60844 167 aa17■□□□□ 0.31
SGCE-207ENST00000447873 COX5BP10606 129 aa17■□□□□ 0.31
SGCE-207ENST00000447873 CELP19835 753 aa17■□□□□ 0.31
SGCE-207ENST00000447873 STOMP27105 288 aa17■□□□□ 0.31
SGCE-207ENST00000447873 CCKARP32238 428 aa17■□□□□ 0.31
SGCE-207ENST00000447873 TGM4P49221 684 aa17■□□□□ 0.31
SGCE-207ENST00000447873 FBXL19-AS1Q494R0 122 aa17■□□□□ 0.31
SGCE-207ENST00000447873 GPR141Q7Z602 305 aa17■□□□□ 0.31
SGCE-207ENST00000447873 ZNF283Q8N7M2 679 aa17■□□□□ 0.31
SGCE-207ENST00000447873 ATPIF1Q9UII2 106 aa17■□□□□ 0.31
SGCE-207ENST00000447873 GTF2A1LQ9UNN4 478 aa17■□□□□ 0.31
SGCE-207ENST00000447873 SLC25A15Q9Y619 301 aa17■□□□□ 0.31
SGCE-207ENST00000447873 R4GMQ9 66 aa17■□□□□ 0.31
SGCE-207ENST00000447873 RTTNQ86VV8 2226 aa17■□□□□ 0.31
SGCE-207ENST00000447873 TRBV2A0A0J9YWF9 115 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 AGFG2O95081 481 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 APOC1P02654 83 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 SERPINA5P05154 406 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 DBHP09172 617 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 CBR1P16152 277 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 CPEP16870 476 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 APEX1P27695 318 aaKnown RBP16.99■□□□□ 0.31
SGCE-207ENST00000447873 LIPAP38571 399 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 CX3CR1P49238 355 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 TPTEP56180 551 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 PSMA6P60900 246 aaKnown RBP16.99■□□□□ 0.31
SGCE-207ENST00000447873 LIPKQ5VXJ0 399 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 ZNF544Q6NX49 715 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 XKRXQ6PP77 449 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 SATL1Q86VE3 508 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 ZNF584Q8IVC4 421 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 OR13F1Q8NGS4 319 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 HSD17B8Q92506 261 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 RNASE6Q93091 150 aaKnown RBP16.99■□□□□ 0.31
SGCE-207ENST00000447873 RNF166Q96A37 237 aaPredicted RBP16.99■□□□□ 0.31
SGCE-207ENST00000447873 DOK1Q99704 481 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 C1QTNF6Q9BXI9 259 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 OR10A4Q9H209 315 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 MOV10Q9HCE1 1003 aaKnown RBP16.99■□□□□ 0.31
SGCE-207ENST00000447873 BRD7Q9NPI1 651 aa16.99■□□□□ 0.31
SGCE-207ENST00000447873 SIRT4Q9Y6E7 314 aaPredicted RBP16.99■□□□□ 0.31
SGCE-207ENST00000447873 LOC110117498-PIK3R3F6TDL0 507 aa16.98■□□□□ 0.31
SGCE-207ENST00000447873 M0R135 149 aa16.98■□□□□ 0.31
SGCE-207ENST00000447873 CCRL2O00421 344 aa16.98■□□□□ 0.31
SGCE-207ENST00000447873 PNPP00491 289 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms