RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 RERGLQ9H628 205 aa12.2□□□□□ -0.46
SREBF1-207ENST00000447641 ZNF442Q9H7R0 627 aa12.2□□□□□ -0.46
SREBF1-207ENST00000447641 CA10Q9NS85 328 aa12.2□□□□□ -0.46
SREBF1-207ENST00000447641 POU2F3Q9UKI9 436 aa12.2□□□□□ -0.46
SREBF1-207ENST00000447641 PCDHGB1Q9Y5G3 927 aa12.2□□□□□ -0.46
SREBF1-207ENST00000447641 ARFGEF3Q5TH69 2177 aa12.2□□□□□ -0.46
SREBF1-207ENST00000447641 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
SREBF1-207ENST00000447641 USF3Q68DE3 2245 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 LOC100509620A0A075B734 347 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 SURF4O15260 269 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 PRODHO43272 600 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 ICMTO60725 284 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 GPANK1O95872 356 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 COX5BP10606 129 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 APEX1P27695 318 aaKnown RBP12.19□□□□□ -0.46
SREBF1-207ENST00000447641 FABP6P51161 128 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 EFNB1P98172 346 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 AQP6Q13520 282 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 SWI5Q1ZZU3 235 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 TMEM236Q5W0B7 351 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 STX19Q8N4C7 294 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 PAQR4Q8N4S7 273 aaPredicted RBP12.19□□□□□ -0.46
SREBF1-207ENST00000447641 AKR7LQ8NHP1 331 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 CNIH3Q8TBE1 160 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 TMEM171Q8WVE6 324 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 C18orf12Q96KH6 178 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 FAIMQ9NVQ4 179 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
SREBF1-207ENST00000447641 CHCHD3Q9NX63 227 aaKnown RBP12.19□□□□□ -0.46
SREBF1-207ENST00000447641 LAMP3Q9UQV4 416 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 LHFPL6Q9Y693 200 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 TLN2Q9Y4G6 2542 aa12.19□□□□□ -0.46
SREBF1-207ENST00000447641 IQCMA0A1B0GVH7 501 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 SLC22A31A6NKX4 558 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 FAM171A2A8MVW0 826 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PTGES3LE9PB15 166 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PRR23D1E9PI22 279 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-207ENST00000447641 INHBBP09529 407 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PRR23D2P0DMB1 279 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-207ENST00000447641 ATP6V1B1P15313 513 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 GABRB1P18505 474 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 STOMP27105 288 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PCSK6P29122 969 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PYCR1P32322 319 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 THBS4P35443 961 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 CENPAP49450 140 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 POU4F2Q12837 409 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 ADIPOQQ15848 244 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 MEP1BQ16820 701 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PCK2Q16822 640 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 LINC01590Q5TEZ4 76 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 LCN1P1Q5VSP4 162 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 AGAP6Q5VW22 663 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 NXNL2Q5VZ03 156 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 ZNF774Q6NX45 483 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PRSS48Q7RTY5 328 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 ALDH16A1Q8IZ83 802 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 MUC15Q8N387 334 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 OR1J2Q8NGS2 313 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 MRPL48Q96GC5 212 aaKnown RBP12.18□□□□□ -0.46
SREBF1-207ENST00000447641 IL4I1Q96RQ9 567 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 COPS4Q9BT78 406 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 HCAR1Q9BXC0 346 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 GSX2Q9BZM3 304 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 CCDC90BQ9GZT6 254 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 DUSP21Q9H596 190 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 CBLN4Q9NTU7 201 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 WARS2Q9UGM6 360 aaKnown RBP12.18□□□□□ -0.46
SREBF1-207ENST00000447641 CYB5R1Q9UHQ9 305 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 PSORS1C1Q9UIG5 152 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 KCNG2Q9UJ96 466 aa12.18□□□□□ -0.46
SREBF1-207ENST00000447641 COL6A5A8TX70 2615 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 SMIM31A0A1B0GVY4 71 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 TMEM129A0AVI4 362 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 OR6C6A6NF89 314 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 SYNGR3O43761 229 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 FADS2O95864 444 aaKnown RBP12.17□□□□□ -0.46
SREBF1-207ENST00000447641 HEXAP06865 529 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 CLUP10909 449 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 CCL2P13500 99 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 SPI1P17947 270 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 MYL12AP19105 171 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 FMO3P31513 532 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 GLRXP35754 106 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 ATP6V1E1P36543 226 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 SERPINF1P36955 418 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 BLVRAP53004 296 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 SCRN3Q0VDG4 424 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 RAB40BQ12829 278 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 APOFQ13790 326 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 EFNB3Q15768 340 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 MSMPQ1L6U9 139 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 TBC1D28Q2M2D7 210 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 CCDC92Q53HC0 331 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-207ENST00000447641 TEX30Q5JUR7 227 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 OTPQ5XKR4 325 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 VASH1Q7L8A9 365 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-207ENST00000447641 FBXL14Q8N1E6 418 aa12.17□□□□□ -0.46
SREBF1-207ENST00000447641 PROKR2Q8NFJ6 384 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms