RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 EIF4E3Q8N5X7 224 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 CHD3Q12873 2000 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 KREMEN2Q8NCW0 462 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 WNT2BQ93097 391 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 GNPNAT1Q96EK6 184 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 DDA1Q9BW61 102 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 GPR37O15354 613 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ZNF439Q8NDP4 499 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 ADGRL4Q9HBW9 690 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 IGHA1P01876 353 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 F13BP05160 661 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 DMKNQ6E0U4 476 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 OR8U1Q8NH10 309 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 TSLPQ969D9 159 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 PIK3IP1Q96FE7 263 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 TMEM30AQ9NV96 361 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 KCNE1BA0A087WTH5 132 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 P2RY10O00398 339 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 GALTP07902 379 aa7.18□□□□□ -1.26
SMG1-202ENST00000446231 DAP3P51398 398 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 ABHD12BQ7Z5M8 362 aaPredicted RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 LMF2Q9BU23 707 aaKnown RBP7.18□□□□□ -1.26
SMG1-202ENST00000446231 OR5H15A6NDH6 313 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 MANSC4A6NHS7 340 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 OR5H1A6NKK0 313 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 TMEM189-UBE2V1I3L0A0 370 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 PRKRAO75569 313 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 OPN1MWP04001 364 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 OPN1MW2P0DN77 364 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 OPN1MW3P0DN78 364 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 DUSP1P28562 367 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SLC6A8P48029 635 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 GATMP50440 423 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ACOT6Q3I5F7 207 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 TLNRD1Q9H1K6 362 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 MYOFQ9NZM1 2061 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 MED19A0JLT2 244 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 PRAMEF27A3QJZ7 478 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 CDRT15L2A8MXV6 281 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ADH5P11766 374 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 NID1P14543 1247 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 WASP42768 502 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 PRAMEF9Q5VWM5 478 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 TMEM59Q9BXS4 323 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 A0A1W2PPE2 198 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 A0A1W2PR48 441 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 WISP3O95389 354 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 RAB38P57729 211 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 RAE1P78406 368 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 ECH1Q13011 328 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 OR8G1Q15617 311 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 BRICD5Q6PL45 260 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 OR13D1Q8NGV5 346 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 OR4F5Q8NH21 305 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 OR4F4Q96R69 305 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 CTDSPLO15194 276 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 PLRG1O43660 514 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 EIF1BO60739 113 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 CTAG2O75638 210 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ACAA1P09110 424 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 EIF1P41567 113 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 FOXO1Q12778 655 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ZNF761Q86XN6 746 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 MRPS28Q9Y2Q9 187 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 FGF18O76093 207 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 PTHLHP12272 177 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ZNF160Q9HCG1 818 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 NXT1Q9UKK6 140 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 ALOX5APP20292 161 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 LIMS2Q7Z4I7 341 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 TGIF2LXQ8IUE1 241 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SLC17A9Q9BYT1 436 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 METTL9Q9H1A3 318 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SIGLEC1Q9BZZ2 1709 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 CXorf65A6NEN9 183 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 MFNGO00587 321 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ZNF385CQ66K41 422 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 PRTFDC1Q9NRG1 225 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ZNF345Q14585 488 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 FCRL6Q6DN72 434 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SLC16A11Q8NCK7 471 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 NMES1Q9C002 83 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 LAG3P18627 525 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 PRDX1Q06830 199 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 RNF165Q6ZSG1 346 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 C10orf111Q8N326 155 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 RAB18Q9NP72 206 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 CSF2RAP15509 400 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SKP2Q13309 424 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SLC17A1Q14916 467 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ARHGAP11BQ3KRB8 267 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 FBXW12Q6X9E4 464 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ARL6IP6Q8N6S5 226 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 EXD3Q8N9H8 876 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ZNF707Q96C28 371 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 TECTBQ96PL2 329 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 VN1R3Q9BXE9 311 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 EPHX3Q9H6B9 360 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 FLVCR1Q9Y5Y0 555 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 PTPN13Q12923 2485 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms