RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 RPL13AP3Q6NVV1 102 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 PGM2L1Q6PCE3 622 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 CFAP77Q6ZQR2 320 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 C1orf229Q6ZS94 237 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-203ENST00000444440 LINC00346Q8IVM7 164 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 NPEPL1Q8NDH3 523 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 SLC26A10Q8NG04 563 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 OR2T29Q8NH02 315 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 OR1F12Q8NHA8 337 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 ELOVL3Q9HB03 270 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 SRA1Q9HD15 236 aaKnown RBP9.21□□□□□ -0.94
SF3A1-203ENST00000444440 RPRD1BQ9NQG5 326 aaKnown RBP9.21□□□□□ -0.94
SF3A1-203ENST00000444440 TBCCD1Q9NVR7 557 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 TMEFF2Q9UIK5 374 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-203ENST00000444440 GPR160Q9UJ42 338 aa9.21□□□□□ -0.94
SF3A1-203ENST00000444440 PURGQ9UJV8 347 aaKnown RBP9.21□□□□□ -0.94
SF3A1-203ENST00000444440 NDRG4Q9ULP0 352 aaKnown RBP9.21□□□□□ -0.94
SF3A1-203ENST00000444440 B4DSR2 109 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 H3BSA7 217 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 BHLHE40O14503 412 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 GNGT2O14610 69 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 ARPC3O15145 178 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 TPD52L2O43399 206 aaKnown RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 TIMM8AO60220 97 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 RENP00797 406 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CST1P01037 141 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 IGHV2-5P01817 119 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 MSMBP08118 114 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 NOS3P29474 1203 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CRABP1P29762 137 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 RPS27P42677 84 aaKnown RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CENPAP49450 140 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CDK5R2Q13319 367 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 FLOT2Q14254 428 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 MICAQ29983 383 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 KRTAP27-1Q3LI81 207 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 FAM209AQ5JX71 171 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CLEC12AQ5QGZ9 265 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 ZNF362Q5T0B9 420 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 SLC35F1Q5T1Q4 408 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 UNQ6126/PRO20091Q6UXV3 157 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 NAA40Q86UY6 237 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 ZBTB46Q86UZ6 589 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 JAZF1Q86VZ6 243 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CYB561A3Q8NBI2 242 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 OR52L1Q8NGH7 329 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 SPATA3Q8NHX4 192 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 SLC7A6OSQ96CW6 309 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CMBLQ96DG6 245 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 DDOQ99489 341 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 IFT27Q9BW83 186 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 CHID1Q9BWS9 393 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 ZNF665Q9H7R5 613 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 PNRC2Q9NPJ4 139 aaKnown RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 G6PC2Q9NQR9 355 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 DECR2Q9NUI1 292 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
SF3A1-203ENST00000444440 MRPL22Q9NWU5 206 aaKnown RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 SAMHD1Q9Y3Z3 626 aaKnown RBP9.2□□□□□ -0.94
SF3A1-203ENST00000444440 DHRS12A0PJE2 317 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 C5orf63A6NC05 138 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 CLDN25C9JDP6 229 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 H0YL77 283 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 GSC2O15499 205 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 GASTP01350 101 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 CD55P08174 381 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 GSTM3P21266 225 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 KITLGP21583 273 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 PYCR1P32322 319 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 GGT2P36268 569 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 ARHGDIAP52565 204 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 TEKQ02763 1124 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.19□□□□□ -0.94
SF3A1-203ENST00000444440 COX10Q12887 443 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 SLC18B1Q6NT16 456 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 DNM1P34Q6PK57 102 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 GLCCI1Q86VQ1 547 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 SPATA24Q86W54 205 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 OR5AS1Q8N127 324 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 OR52E2Q8NGJ4 325 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 OR10S1Q8NGN2 331 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 OR4Q3Q8NH05 313 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 CANT1Q8WVQ1 401 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 CCL17Q92583 94 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 TMEM186Q96B77 213 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 HAVCR1Q96D42 359 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 ELMOD3Q96FG2 381 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 SIGLEC11Q96RL6 698 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 MMADHCQ9H3L0 296 aaPredicted RBP9.19□□□□□ -0.94
SF3A1-203ENST00000444440 WDR76Q9H967 626 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 PTTG3PQ9NZH4 202 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 CDH10Q9Y6N8 788 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 U3KQV3 271 aa9.19□□□□□ -0.94
SF3A1-203ENST00000444440 STAB1Q9NY15 2570 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 PLSCR5A0PG75 271 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 PLPP2O43688 288 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 SOX14O95416 240 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 IGHV2-70P01814 119 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 MT-ND5P03915 603 aa9.18□□□□□ -0.94
SF3A1-203ENST00000444440 HNF1AP20823 631 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms