RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-211ENST00000443563 APOC1P02654 83 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 LIPAP38571 399 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 EFNA4P52798 201 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 DSCR9P59020 149 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 PPP1CBP62140 327 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 APOFQ13790 326 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TAF13Q15543 124 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 NKPD1Q17RQ9 610 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 LINC01590Q5TEZ4 76 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 MBNL2Q5VZF2 373 aaKnown RBP9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TMEM154Q6P9G4 183 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 RHOUQ7L0Q8 258 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 DCXRQ7Z4W1 244 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TGIF2LYQ8IUE0 185 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 GID4Q8IVV7 300 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 ZNF101Q8IZC7 436 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 CBR4Q8N4T8 237 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TCEANCQ8N8B7 351 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 ZNF454Q8N9F8 522 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 OR6N2Q8NGY6 317 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TMEM163Q8TC26 289 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 NEU4Q8WWR8 484 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-211ENST00000443563 APOBEC3DQ96AK3 386 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-211ENST00000443563 SLAMF6Q96DU3 332 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 SYT3Q9BQG1 590 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 TOR3AQ9H497 397 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 MYOZ1Q9NP98 299 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-211ENST00000443563 C8orf4Q9NR00 106 aa9.31□□□□□ -0.92
HDAC6-211ENST00000443563 DDX28Q9NUL7 540 aaKnown RBP9.31□□□□□ -0.92
HDAC6-211ENST00000443563 CGGBP1Q9UFW8 167 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-211ENST00000443563 PRRC2AP48634 2157 aaKnown RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 SLC22A31A6NKX4 558 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 PRKYO43930 277 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 IGHV3-13P01766 116 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 IGHV4-39P01824 125 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 ADRA2AP08913 450 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 CSF3P09919 207 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 SLC2A5P22732 501 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 EPHA2P29317 976 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 SLC15A1P46059 708 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 GRB2P62993 217 aaKnown RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 EFNB1P98172 346 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 DBPQ10586 325 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 EIF2B1Q14232 305 aaKnown RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 CLEC12BQ2HXU8 276 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 NXNL2Q5VZ03 156 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 LYPD4Q6UWN0 246 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 RFPL4BQ6ZWI9 263 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 MEPCEQ7L2J0 689 aaKnown RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 DPY19L4Q7Z388 723 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 LRP11Q86VZ4 500 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 TIGD4Q8IY51 512 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 OR8J1Q8NGP2 316 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 SLC25A40Q8TBP6 338 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 TRUB1Q8WWH5 349 aaKnown RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 ZMYND19Q96E35 227 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 MARS2Q96GW9 593 aaKnown RBP9.3□□□□□ -0.92
HDAC6-211ENST00000443563 MAP6Q96JE9 813 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 RDH12Q96NR8 316 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 TEAD3Q99594 435 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 COPS4Q9BT78 406 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 OR2J1Q9GZK6 312 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 YIPF3Q9GZM5 350 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 SP140LQ9H930 580 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 CYSLTR2Q9NS75 346 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 IMPAD1Q9NX62 359 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 TAAR3PQ9P1P4 343 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 FZR1Q9UM11 496 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 ARFGEF3Q5TH69 2177 aa9.3□□□□□ -0.92
HDAC6-211ENST00000443563 PLSCR5A0PG75 271 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 ERICH4A6NGS2 130 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 ANKRD65E5RJM6 399 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 F5H5K5 113 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 M0R135 149 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 SSX4O60224 188 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 CLPTM1O96005 669 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 NGFP01138 241 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 LYNP07948 512 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 DBHP09172 617 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 ACSM4P0C7M7 580 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 ANPEPP15144 967 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 HSD11B1P28845 292 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 RPS27P42677 84 aaKnown RBP9.29□□□□□ -0.92
HDAC6-211ENST00000443563 ERVS71-1P61550 626 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 MALLQ13021 153 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 TMED1Q13445 227 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 GGTLC2Q14390 218 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 RCN1Q15293 331 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 MSMPQ1L6U9 139 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 PCGF3Q3KNV8 242 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 KRTAP27-1Q3LI81 207 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 ZMAT1Q5H9K5 638 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 SPATA46Q5T0L3 261 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 KCTD18Q6PI47 426 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-211ENST00000443563 CLEC2AQ6UVW9 174 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 DRAM2Q6UX65 266 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 SLC16A9Q7RTY1 509 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 WFDC11Q8NEX6 87 aa9.29□□□□□ -0.92
HDAC6-211ENST00000443563 BBS1Q8NFJ9 593 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms