RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 OR1L3Q8NH93 324 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 NKD1Q969G9 470 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 EDEM2Q9BV94 578 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 GPN3Q9UHW5 284 aaPredicted RBP14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF230Q9UIE0 474 aaPredicted RBP14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 KLK13Q9UKR3 277 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 NOP16Q9Y3C1 178 aaKnown RBP14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 COL5A1P20908 1838 aaPredicted RBP14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 IGHV1OR15-9A0A0B4J2B8 117 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 A0A1B0GW55 424 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DISC1C4P0D8 188 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 NPIPA5E9PKD4 350 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 TEX46H3BTG2 121 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 HLA-AP01891 365 aaKnown RBP14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 CSN2P05814 226 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 UBCP0CG48 685 aaKnown RBP14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DUX4L2P0CJ85 424 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DUX4L3P0CJ86 424 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DUX4L4P0CJ87 422 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DUX4L5P0CJ88 424 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DUX4L6P0CJ89 424 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DUX4L7P0CJ90 424 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 IL11P20809 199 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 CD34P28906 385 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 FMODQ06828 376 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 MEF2DQ14814 521 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DEGS2Q6QHC5 323 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 SYT13Q7L8C5 426 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF441Q8N8Z8 693 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 ACBD4Q8NC06 268 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 SMRP1Q8NCR6 262 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 TSTD1Q8NFU3 115 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 OR4D6Q8NGJ1 314 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 ST7LQ8TDW4 575 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 PDCD10Q9BUL8 212 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 DUX4Q9UBX2 424 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 GLS2Q9UI32 602 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 FBXO4Q9UKT5 387 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 NPIPA1Q9UND3 350 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 LAMA1P25391 3075 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 C2CD4DB7Z1M9 353 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF217O75362 1048 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 WDPCPO95876 746 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 UBBP0CG47 229 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 CD27P26842 260 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 DAP3P51398 398 aaKnown RBP14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 RPS27AP62979 156 aaKnown RBP14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 UBA52P62987 128 aaKnown RBP14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 EIF4E3Q8N5X7 224 aaKnown RBP14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 OR13C8Q8NGS7 320 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 DMRTA2Q96SC8 542 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 SLC6A7Q99884 636 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 PRRT1Q99946 306 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 VN1R1Q9GZP7 353 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 SLC25A32Q9H2D1 315 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 CENPMQ9NSP4 180 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 COMMD9Q9P000 198 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 A0A1W2PR77 199 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 D6RAR5 112 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 LMO7DNF2Z398 122 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 MS4A18H0YCH9 400 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 HPP00738 406 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 H2BFMP0C1H6 154 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 RAB6AP20340 208 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 LBX1P52954 281 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 TDGQ13569 410 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 PCK2Q16822 640 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 MS4A18Q3C1V0 323 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 C1orf189Q5VU69 101 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 C17orf107Q6ZR85 190 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 CD163Q86VB7 1156 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 OR4S1Q8NGB4 309 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 ASB10Q8WXI3 467 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 ST8SIA2Q92186 375 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 SLC6A15Q9H2J7 730 aa14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 GDF2Q9UK05 429 aaPredicted RBP14.75□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF98A6NK75 572 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 TMEM200CA6NKL6 621 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 P2RY10O00398 339 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 HNRNPKP61978 463 aaKnown RBP eCLIP14.74□□□□□ -0.054e-6■■□□□ 11.8
SEMA3B-207ENST00000441915 OR7A5Q15622 319 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 NKPD1Q17RQ9 610 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 CDNFQ49AH0 187 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 RNASE10Q5GAN6 216 aaKnown RBP14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 MISPQ8IVT2 679 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 ZBTB8AQ96BR9 441 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF416Q9BWM5 594 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 LDAHQ9H6V9 325 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 RAB22AQ9UL26 194 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 A0A1B0GTI1 187 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 LMX1BO60663 402 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 OR1D5P58170 312 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 CXADRP78310 365 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 ZP4Q12836 540 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 PHF19Q5T6S3 580 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 OGFOD3Q6PK18 319 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 AQP3Q92482 292 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 ARL5BQ96KC2 179 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 GPR160Q9UJ42 338 aa14.74□□□□□ -0.05
SEMA3B-207ENST00000441915 KLF2Q9Y5W3 355 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms