RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 DHFR2Q86XF0 187 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 OR9Q2Q8NGE9 314 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 OR52E2Q8NGJ4 325 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 LRGUKQ96M69 825 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 DCLRE1CQ96SD1 692 aaKnown RBP16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 POFUT1Q9H488 388 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 UBAP1Q9NZ09 502 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 PTTG3PQ9NZH4 202 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 B9D1Q9UPM9 204 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 CDH10Q9Y6N8 788 aa16.86■□□□□ 0.29
SHROOM1-204ENST00000440118 IGLV1-36A0A0B4J1U3 117 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 TRAV20A0A0B4J274 112 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 DCTN6O00399 190 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 IDH3BO43837 385 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 CCNB2O95067 398 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 FAM107AO95990 144 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 DBHP09172 617 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 TNFRSF1AP19438 455 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 CALB2P22676 271 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 KCNMB1Q16558 191 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 ACSM5Q6NUN0 579 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 CORO6Q6QEF8 472 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 LINC00346Q8IVM7 164 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 PHC2Q8IXK0 858 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 OR6V1Q8N148 313 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 APOBEC3DQ96AK3 386 aaPredicted RBP16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 CCDC124Q96CT7 223 aaKnown RBP16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 PITX2Q99697 317 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 COQ7Q99807 217 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 EGLN3Q9H6Z9 239 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 TBC1D23Q9NUY8 699 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 STARD10Q9Y365 291 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 LYVE1Q9Y5Y7 322 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 LHFPL6Q9Y693 200 aa16.85■□□□□ 0.29
SHROOM1-204ENST00000440118 J3QW42 95 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 SURF4O15260 269 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 CD55P08174 381 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 ADH4P08319 380 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 KITLGP21583 273 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 LMO4P61968 165 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 SCGB2A2Q13296 93 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 FAM98BQ52LJ0 330 aaKnown RBP16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 LIPNQ5VXI9 398 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 FAHD2BQ6P2I3 314 aaPredicted RBP16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 OR5AS1Q8N127 324 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 PROKR2Q8NFJ6 384 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 SLC26A10Q8NG04 563 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 FAHD2AQ96GK7 314 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 MAGIXQ9H6Y5 334 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 REEP1Q9H902 201 aa16.84■□□□□ 0.29
SHROOM1-204ENST00000440118 UBOX5O94941 541 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 PNPP00491 289 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 ZNF823P16415 610 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 COX10Q12887 443 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 HLXQ14774 488 aaPredicted RBP16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 LCN8Q6JVE9 175 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 ATG16L2Q8NAA4 619 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 AQP11Q8NBQ7 271 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 ST7LQ8TDW4 575 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 PTP4A1Q93096 173 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 BTBD10Q9BSF8 475 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 METTL17Q9H7H0 456 aaPredicted RBP16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 METRNQ9UJH8 293 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 PCDHB10Q9UN67 800 aa16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 SAMHD1Q9Y3Z3 626 aaKnown RBP16.83■□□□□ 0.28
SHROOM1-204ENST00000440118 A0A0G2JMP0 313 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 A0A0X1KG70 313 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 OR6C68A6NDL8 312 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 TCF21O43680 179 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 IGHV2-5P01817 119 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 RAC2P15153 192 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 SRSF2Q01130 221 aaKnown RBP16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 ECH1Q13011 328 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 CDK5R2Q13319 367 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 TRIM25Q14258 630 aaKnown RBP16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 TEX29Q8N6K0 151 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 OR4M2Q8NGB6 313 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 OR2T4Q8NH00 348 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 POP5Q969H6 163 aaKnown RBP16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 HAVCR1Q96D42 359 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 ATF6BQ99941 703 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 HCAR1Q9BXC0 346 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 TRIM15Q9C019 465 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 OCEL1Q9H607 264 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 KLHL21Q9UJP4 597 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 PRPF19Q9UMS4 504 aaKnown RBP16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 U3KQV3 271 aa16.82■□□□□ 0.28
SHROOM1-204ENST00000440118 F5H5K5 113 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 MAGEA2P43356 314 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 ERFP50548 548 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 DBPQ10586 325 aaPredicted RBP16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 PPP1R8Q12972 351 aaKnown RBP16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 KRTAP24-1Q3LI83 254 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 OR2T2Q6IF00 324 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 SLC18B1Q6NT16 456 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 CFAP77Q6ZQR2 320 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 ZBTB46Q86UZ6 589 aa16.81■□□□□ 0.28
SHROOM1-204ENST00000440118 RFLNBQ8N5W9 214 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1268.2 ms