RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 VCX3AQ9NNX9 186 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 CENPMQ9NSP4 180 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 SLCO1C1Q9NYB5 712 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 IKZF2Q9UKS7 526 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 ICMTO60725 284 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ABHD16AO95870 558 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 RPSAP08865 295 aaKnown RBP11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ADRA2AP08913 450 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 PATE4P0C8F1 98 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 STOMP27105 288 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 APLNRP35414 380 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 GDI2P50395 445 aaKnown RBP11.03□□□□□ -0.64
SCLT1-202ENST00000439369 TAS2R43P59537 309 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 BDH1Q02338 343 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ACSM1Q08AH1 577 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 TBC1D28Q2M2D7 210 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF829Q3KNS6 432 aaPredicted RBP11.03□□□□□ -0.64
SCLT1-202ENST00000439369 CCDC58Q4VC31 144 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF544Q6NX49 715 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 FDX2Q6P4F2 183 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 TMEM154Q6P9G4 183 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ARL9Q6T311 187 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 DRAM2Q6UX65 266 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 SEZ6L2Q6UXD5 910 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 LRRN1Q6UXK5 716 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 SSX6Q7RTT6 188 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 RFLNBQ8N5W9 214 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF485Q8NCK3 441 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 AKR7LQ8NHP1 331 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 MED18Q9BUE0 208 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 MOB1AQ9H8S9 216 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ELOVL3Q9HB03 270 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 ISYNA1Q9NPH2 558 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
SCLT1-202ENST00000439369 MRM2Q9UI43 246 aaKnown RBP11.03□□□□□ -0.64
SCLT1-202ENST00000439369 LSM2Q9Y333 95 aaKnown RBP11.03□□□□□ -0.64
SCLT1-202ENST00000439369 LRP12Q9Y561 859 aa11.03□□□□□ -0.64
SCLT1-202ENST00000439369 TUBAL3A6NHL2 446 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 PRR32B1ATL7 298 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 GOSR1O95249 250 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 THBDP07204 575 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 IGFBP2P18065 325 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 HSD11B1P28845 292 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 TGM4P49221 684 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 RGS6P49758 472 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 MMP16P51512 607 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 GBX2P52951 348 aaPredicted RBP11.02□□□□□ -0.65
SCLT1-202ENST00000439369 CDH15P55291 814 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 TPTEP56180 551 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 PSMA6P60900 246 aaKnown RBP11.02□□□□□ -0.65
SCLT1-202ENST00000439369 TUBA1BP68363 451 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 EMX1Q04741 257 aaPredicted RBP11.02□□□□□ -0.65
SCLT1-202ENST00000439369 RAB39AQ14964 217 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 SPHARQ15513 63 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 UBE2UQ5VVX9 321 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 LIPNQ5VXI9 398 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 UNQ6126/PRO20091Q6UXV3 157 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 TUBA1AQ71U36 451 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF367Q7RTV3 350 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF584Q8IVC4 421 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 YIPF7Q8N8F6 280 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 ACBD4Q8NC06 268 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 CPEB3Q8NE35 698 aaKnown RBP11.02□□□□□ -0.65
SCLT1-202ENST00000439369 SLC30A7Q8NEW0 376 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 ITFG2Q969R8 447 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 PELI1Q96FA3 418 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 POM121L2Q96KW2 1035 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 C4orf36Q96KX1 117 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 WFIKKN1Q96NZ8 548 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 MRPS26Q9BYN8 205 aaKnown RBP11.02□□□□□ -0.65
SCLT1-202ENST00000439369 ACOT13Q9NPJ3 140 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 TRIM36Q9NQ86 728 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 BABAM2Q9NXR7 383 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 CLEC2DQ9UHP7 191 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 GNG8Q9UK08 70 aa11.02□□□□□ -0.65
SCLT1-202ENST00000439369 IGHV1-18A0A0C4DH31 117 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 A0A1W2PR80 420 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 J3QLW9 94 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 M0R135 149 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF19P17023 458 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 PCMT1P22061 227 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 TUBG1P23258 451 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 PTAFRP25105 342 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 APEX1P27695 318 aaKnown RBP11.01□□□□□ -0.65
SCLT1-202ENST00000439369 PCSK6P29122 969 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 IDH3GP51553 393 aaPredicted RBP11.01□□□□□ -0.65
SCLT1-202ENST00000439369 CCR9P51686 369 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 OR12D2P58182 307 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 SRSF1Q07955 248 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCLT1-202ENST00000439369 RSPO1Q2MKA7 263 aaPredicted RBP11.01□□□□□ -0.65
SCLT1-202ENST00000439369 TP53I3Q53FA7 332 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 ZNF799Q96GE5 643 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 COG8Q96MW5 612 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 DOK1Q99704 481 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 TUBG2Q9NRH3 451 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 R4GMQ9 66 aa11.01□□□□□ -0.65
SCLT1-202ENST00000439369 LOC100509620A0A075B734 347 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms