RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TRBV5-7A0A0A0MS05 114 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 C9orf172C9J069 976 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 MASP2O00187 686 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 PHYHO14832 338 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 MT-CO3P00414 261 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 TCN2P20062 427 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 NFYAP23511 347 aaPredicted RBP12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 RAG2P55895 527 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 EIF2B1Q14232 305 aaKnown RBP12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 C17orf107Q6ZR85 190 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 OR51D1Q8NGF3 324 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 SPACA9Q96E40 222 aaPredicted RBP12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 ABHD6Q9BV23 337 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 METTL7AQ9H8H3 244 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 ZNF160Q9HCG1 818 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 RABL2AQ9UBK7 228 aaPredicted RBP12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 GPR160Q9UJ42 338 aa12.4□□□□□ -0.42
PTCHD3-201ENST00000438700 PCNX2A6NKB5 2137 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 CNTRLQ7Z7A1 2325 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 ANKUB1A6NFN9 424 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 FTCDNL1E5RQL4 147 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 RAB40ALP0C0E4 278 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 IFNGR1P15260 489 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 TAS2R20P59543 309 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 PSMA6P60900 246 aaKnown RBP12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 GLO1Q04760 184 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 HLXQ14774 488 aaPredicted RBP12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 ZNF227Q86WZ6 799 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 RAB40AQ8WXH6 277 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 TMEM234Q8WY98 164 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 C7orf50Q9BRJ6 194 aaKnown RBP12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 ACTR6Q9GZN1 396 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 MED29Q9NX70 200 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 FBXO9Q9UK97 447 aaPredicted RBP12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 TCFL5Q9UL49 500 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 NSG1A0A0A6YYJ2 146 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 OR2T1O43869 369 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 ZNF432O94892 652 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 DKK1O94907 266 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 TGM6O95932 706 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 OPN1LWP04000 364 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 OTX2P32243 289 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 PTGDSP41222 190 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 EFNB2P52799 333 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 POU3F1Q03052 451 aaPredicted RBP12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 FOXF1Q12946 379 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 MEIOBQ8N635 442 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 PLPP7Q8NBV4 271 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 ZNF248Q8NDW4 579 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 STK35Q8TDR2 534 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 MCHR2Q969V1 340 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 PPP4R1LQ9P1A2 415 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 FBXL3Q9UKT7 428 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 LRP12Q9Y561 859 aa12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 EP300Q09472 2414 aaPredicted RBP12.39□□□□□ -0.43
PTCHD3-201ENST00000438700 EML6Q6ZMW3 1958 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 AHCTF1Q8WYP5 2266 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 MS4A18H0YCH9 400 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 ITGA5P08648 1049 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 BAMBIQ13145 260 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 MS4A18Q3C1V0 323 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 TFAP2EQ6VUC0 442 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 PPP1R32Q7Z5V6 425 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 OR5M1Q8NGP8 315 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 M1APQ8TC57 530 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 PARD6AQ9NPB6 346 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 CCDC187A0A096LP49 1063 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 IGKV1D-43A0A0B4J1Z2 117 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 NPIPA5E9PKD4 350 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 PLATP00750 562 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 INPP5JQ15735 1006 aaPredicted RBP12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 CSRP2Q16527 193 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 HES3Q5TGS1 186 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 ASPHD2Q6ICH7 369 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 GLDNQ6ZMI3 551 aaPredicted RBP12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 RELL2Q8NC24 303 aaPredicted RBP12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 RNF128Q8TEB7 428 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 TMEM185BQ9H7F4 350 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 PLEKHA1Q9HB21 404 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 NPIPA1Q9UND3 350 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 WIF1Q9Y5W5 379 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 ETV7Q9Y603 341 aa12.38□□□□□ -0.43
PTCHD3-201ENST00000438700 A8MXK9 166 aa12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 ECDO95905 644 aaPredicted RBP12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 IGHEP01854 428 aa12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 APOC3P02656 99 aa12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 CD63P08962 238 aa12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 RIDAP52758 137 aaKnown RBP12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 TLE3Q04726 772 aa12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 TEX30Q5JUR7 227 aa12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 METTL11BQ5VVY1 283 aa12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 KCTD18Q6PI47 426 aaPredicted RBP12.37□□□□□ -0.43
PTCHD3-201ENST00000438700 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms