RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GLIPR2Q9H4G4 154 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 NANOGQ9H9S0 305 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 VCX3AQ9NNX9 186 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 ASCL3Q9NQ33 180 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 ADA2Q9NZK5 511 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 RPS6KB2Q9UBS0 482 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 PHF11Q9UIL8 331 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 PCDH11XQ9BZA7 1347 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 NUP155O75694 1391 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 LRPPRCP42704 1394 aaKnown RBP2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 MTUS2Q5JR59 1369 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 ABCC11Q96J66 1382 aa2.61□□□□□ -1.99
LSM1P1-201ENST00000438629 COL16A1Q07092 1604 aaPredicted RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 NUP160Q12769 1436 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 NPATQ14207 1427 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 FABP12A6NFH5 140 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 KLRC4-KLRK1H3BQV0 150 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 BET1O15155 118 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PRKYO43930 277 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PFDN1O60925 122 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 FARS2O95363 451 aaKnown RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 LYPLA2O95372 231 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 CA1P00915 261 aaPredicted RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TIMP1P01033 207 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC35E2BP0CK96 405 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 RD3LP0DJH9 198 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PSKH1P11801 424 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ABOP16442 354 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 BCKDHBP21953 392 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 DTYMKP23919 212 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 CD82P27701 267 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TNFSF9P41273 254 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 NPBWR2P48146 333 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TGM4P49221 684 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 CCR8P51685 355 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PRKXP51817 358 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 AP1S2P56377 157 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ATP6V0D1P61421 351 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ARF6P62330 175 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TLE4Q04727 773 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ITIH4Q14624 930 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PON3Q15166 354 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TRIM16LQ309B1 348 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 GPR107Q5VW38 600 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 UQCC3Q6UW78 93 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 UNQ9370/PRO34162Q6UXP9 181 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 HSDL2Q6YN16 418 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PGAP1Q75T13 922 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 LHFPL3Q86UP9 236 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 BBS7Q8IWZ6 715 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PRSS58Q8IYP2 241 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 CMTM8Q8IZV2 173 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 C8orf31Q8N9H6 132 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 CCDC71LQ8N9Z2 235 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 LINC01555Q8NAE3 123 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ACTL9Q8TC94 416 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 NAT6Q93015 286 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ECHDC3Q96DC8 303 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 SEC22AQ96IW7 307 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 C12orf42Q96LP6 360 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 MBOAT7Q96N66 472 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ATP5SQ99766 215 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ARHGDIGQ99819 225 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 MED10Q9BTT4 135 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 RNF126Q9BV68 326 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 BCL2L14Q9BZR8 327 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 POLR2J2Q9GZM3 115 aaKnown RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 POLR2J3Q9H1A7 115 aaKnown RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 SLC38A1Q9H2H9 487 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 REEP4Q9H6H4 257 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PARVAQ9NVD7 372 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TAS2R9Q9NYW1 312 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 UVRAGQ9P2Y5 699 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ZNF282Q9UDV7 671 aaPredicted RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ERVW-1Q9UQF0 538 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PRG3Q9Y2Y8 225 aaPredicted RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TBL2Q9Y4P3 447 aaKnown RBP2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 HEY1Q9Y5J3 304 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 URGCP-MRPS24S4R325 110 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 TAF1LQ8IZX4 1826 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 PLEKHG1Q9ULL1 1385 aa2.6□□□□□ -1.99
LSM1P1-201ENST00000438629 ADGRL3Q9HAR2 1447 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 LRRK1Q38SD2 2015 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 ERCC6Q03468 1493 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 WDR7Q9Y4E6 1490 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 MYO15BQ96JP2 1530 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 TRBV9A0A0B4J1U6 114 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 WI2-2373I1.2A0A1W2PRP0 233 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 ZNF98A6NK75 572 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 ZNF729A6NN14 1252 aaPredicted RBP2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 K7N7A8 449 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 RAB29O14966 203 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 SNAI2O43623 268 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 TOM1O60784 492 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 DEXIO95424 95 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 ETHE1O95571 254 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 SNAP29O95721 258 aa2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 OXSR1O95747 527 aaPredicted RBP2.59□□□□□ -1.99
LSM1P1-201ENST00000438629 IGHG4P01861 327 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms