RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 TM4SF18Q96CE8 201 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 COL21A1Q96P44 957 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 VCXQ9H320 206 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 EDA2RQ9HAV5 297 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 PATZ1Q9HBE1 687 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 MRPS30Q9NP92 439 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 ACP6Q9NPH0 428 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 RPRD1BQ9NQG5 326 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 FAM49BQ9NUQ9 324 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 MYEF2Q9P2K5 600 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 DOCK9Q9BZ29 2069 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 COL4A4P53420 1690 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 PREX1Q8TCU6 1659 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 TARBP1Q13395 1621 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 IGKV2D-24A0A075B6R9 120 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 KCNE1BA0A087WTH5 132 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 IGLV1-36A0A0B4J1U3 117 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 IGHV5-51A0A0C4DH38 117 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 IGHV3-66A0A0C4DH42 116 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 GOLGA6L7A0A1B0GV03 622 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 H0YC42 278 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 H7C0C1 242 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 AKR7A2O43488 359 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 ENTPD5O75356 428 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 FCN3O75636 299 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 SLC25A14O95258 325 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 IFNW1P05000 195 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 POLR2MP0CAP2 368 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 TLX1NBP0CAT3 122 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CT45A6P0DMU7 189 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CT45A5P0DMU8 189 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CT45A7P0DMV0 189 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 GZMAP12544 262 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 U2AF2P26368 475 aaKnown RBP eCLIP2.25□□□□□ -2.057e-7■■■■□ 21.2
TRAPPC13-204ENST00000438419 RAB7AP51149 207 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 PFN3P60673 137 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 RAP1AP62834 184 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZNF266Q14584 549 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 DEFB116Q30KQ4 102 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CT45A1Q5HYN5 189 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 UBE2UQ5VVX9 321 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CEMP1Q6PRD7 247 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 FBXW12Q6X9E4 464 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZFP2Q6ZN57 461 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 C12orf56Q8IXR9 622 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 METTL13Q8N6R0 699 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 SNX31Q8N9S9 440 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 OR56A4Q8NGH8 313 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 OR52E2Q8NGJ4 325 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CT45A3Q8NHU0 189 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CA5BP1Q8WTZ4 195 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 FOPNLQ96NB1 174 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CHAC1Q9BUX1 264 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 SPNS1Q9H2V7 528 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 PIGUQ9H490 435 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 TMEM38AQ9H6F2 299 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZDHHC4Q9NPG8 344 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 CTSFQ9UBX1 484 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 TBX21Q9UL17 535 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 PSG11Q9UQ72 335 aa2.25□□□□□ -2.05
TRAPPC13-204ENST00000438419 GLI2P10070 1586 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 A0A1B0GTQ1 180 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 A0A1W2PP18 115 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 HLA-HP01893 362 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 HBE1P02100 147 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 KRT16P08779 473 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZNF823P16415 610 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 CTRB1P17538 263 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 MAGP20916 626 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 MNAT1P51948 309 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 UBE2NP61088 152 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 IFT88Q13099 833 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 WDR43Q15061 677 aaKnown RBP eCLIP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 PON2Q15165 354 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 QPRTQ15274 297 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 SNRNP35Q16560 246 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 TRMT5Q32P41 509 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 BEX5Q5H9J7 111 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 TPTE2P1Q5T6R2 138 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 PIP5KL1Q5T9C9 394 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZNF691Q5VV52 312 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 PLCXD3Q63HM9 321 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 MBOAT2Q6ZWT7 520 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 ABHD12BQ7Z5M8 362 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 ZNF547Q8IVP9 402 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 FAM71AQ8IYT1 594 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 SAXO1Q8IYX7 474 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 FAM86B1Q8N7N1 296 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 CYB561D1Q8N8Q1 229 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 CHST4Q8NCG5 386 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 OR10AD1Q8NGE0 317 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 NTAN1Q96AB6 310 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 DYNLL2Q96FJ2 89 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 OR2A5Q96R48 311 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 ANKRD60Q9BZ19 345 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 PARP12Q9H0J9 701 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 NTN4Q9HB63 628 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 MRM3Q9HC36 420 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 LHX9Q9NQ69 397 aa2.24□□□□□ -2.05
TRAPPC13-204ENST00000438419 CHRAC1Q9NRG0 131 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms