RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 DBHP09172 617 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 RPS2P15880 293 aaKnown RBP9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 SDHAP31040 664 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 GATA4P43694 442 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 YAP1P46937 504 aaKnown RBP9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 MTNR1AP48039 350 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 RGS6P49758 472 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 FXYD6P3P58550 94 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 HIST1H3AP68431 136 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 KRR1Q13601 381 aaKnown RBP9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 HLXQ14774 488 aaPredicted RBP9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 MAPRE2Q15555 327 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 KCNMB1Q16558 191 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 ZNF404Q494X3 552 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 ZBED5Q49AG3 693 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 HIST2H3PS2Q5TEC6 136 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 OTPQ5XKR4 325 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 GPR139Q6DWJ6 353 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 CGB2Q6NT52 195 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 SLC27A4Q6P1M0 643 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 TBPL2Q6SJ96 375 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 BTNL3Q6UXE8 466 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 ZNF730Q6ZMV8 503 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 COLCA1Q6ZS62 124 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 HIST2H3AQ71DI3 136 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 KLBQ86Z14 1044 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 GLB1L2Q8IW92 636 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 OR8G5Q8NG78 346 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 OR52E2Q8NGJ4 325 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 LZICQ8WZA0 190 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 TAF15Q92804 592 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 COQ7Q99807 217 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 FNDC11Q9BVV2 318 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 TMEM165Q9HC07 324 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 NRIP3Q9NQ35 241 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 CMTM6Q9NX76 183 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 GMPR2Q9P2T1 348 aaKnown RBP9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 GRHPRQ9UBQ7 328 aa9.15□□□□□ -0.94
SPTLC1P4-201ENST00000435997 MDFIC2A0A1B0GVS7 189 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 XKRYO14609 159 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 IMPA2O14732 288 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PTP4A3O75365 173 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 KHDRBS3O75525 346 aaKnown RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CYB5R3P00387 301 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 RPL4P36578 427 aaKnown RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PMELP40967 661 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 COX10Q12887 443 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 IFI44LQ53G44 452 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 C8orf82Q6P1X6 216 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PTCHD4Q6ZW05 846 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CBLL1Q75N03 491 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ARPINQ7Z6K5 226 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ADCK1Q86TW2 530 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SLC15A3Q8IY34 581 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OR5AS1Q8N127 324 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 FITM2Q8N6M3 262 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OR13G1Q8NGZ3 307 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ZNF420Q8TAQ5 688 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 Q8TCH9 128 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SLC7A13Q8TCU3 470 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 WFDC12Q8WWY7 111 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 RAB40AQ8WXH6 277 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 APOBEC3DQ96AK3 386 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TMEM246Q9BRR3 403 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 MS4A7Q9GZW8 240 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 HDHD2Q9H0R4 259 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 VIPAS39Q9H9C1 493 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 MIOXQ9UGB7 285 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TMEM5Q9Y2B1 443 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 COA3Q9Y2R0 106 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 LHFPL6Q9Y693 200 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PKD1L1Q8TDX9 2849 aa9.14□□□□□ -0.95
SPTLC1P4-201ENST00000435997 IGHV3OR16-10A0A075B7F0 116 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 KIR2DS1A0A191URI9 304 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 A0A1W2PRQ8 180 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SRRM5B3KS81 715 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 H0YL77 283 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 DCTN6O00399 190 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PHYHO14832 338 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SLC22A2O15244 555 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SLC16A7O60669 478 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 NDUFB2O95178 105 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ZNF205O95201 554 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 PTBP3O95758 552 aaKnown RBP9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 TXNDC12O95881 172 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SELEP16581 610 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OMPP47874 163 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 SRP9P49458 86 aaKnown RBP9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 RAD23AP54725 363 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 GNB2P62879 340 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 DGCR6Q14129 220 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 RSPO1Q2MKA7 263 aaPredicted RBP9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 OR2T2Q6IF00 324 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 C1orf94Q6P1W5 598 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 C16orf87Q6PH81 154 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ZNF841Q6ZN19 808 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 JAZF1Q86VZ6 243 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 CELF2-AS1Q8N7Q2 184 aa9.13□□□□□ -0.95
SPTLC1P4-201ENST00000435997 ATG16L2Q8NAA4 619 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms