RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR2M4Q96R27 311 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 ZDHHC5Q9C0B5 715 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 TM7SF3Q9NS93 570 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 PARPBPQ9NWS1 579 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 BLOC1S5-TXNDC5H3BN57 136 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF354AO60765 605 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-202ENST00000435070 F10P00742 488 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 MBP02144 154 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 FCGR3AP08637 254 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 PMPCAQ10713 525 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 MIDNQ504T8 468 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 SLC39A5Q6ZMH5 540 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 KLHDC8AQ8IYD2 350 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 OR6N2Q8NGY6 317 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 MARCH1Q8TCQ1 289 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 OVCA2Q8WZ82 227 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 MR1Q95460 341 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 OR52A5Q9H2C5 316 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 HIPK2Q9H2X6 1198 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 IL36AQ9UHA7 158 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 ANGPTL7O43827 346 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 RDH16O75452 317 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 DIO1P49895 249 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 VAMP2P63027 116 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 RAB32Q13637 225 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 GLYATL3Q5SZD4 288 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 LEG1Q6P5S2 330 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 ASB17Q8WXJ9 295 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 F8VVB4 439 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 F8VWA3 439 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 CD5P06127 495 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 MSX1P28360 303 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 TEX30Q5JUR7 227 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 COMMD1Q8N668 190 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 OR2L2Q8NH16 312 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 G6PC3Q9BUM1 346 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 AICDAQ9GZX7 198 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 KCNJ16Q9NPI9 418 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 RXFP3Q9NSD7 469 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 SLC22A13Q9Y226 551 aa6.74□□□□□ -1.33
CPSF6-202ENST00000435070 EDN3P14138 238 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 MDKP21741 143 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 KHDC3LQ587J8 217 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 SLC2A12Q8TD20 617 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 BSCL2Q96G97 398 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 TCTN2Q96GX1 697 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF587Q96SQ5 575 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 ALG12Q9BV10 488 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 HAO2Q9NYQ3 351 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 TNFP01375 233 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 NGFRP08138 427 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 SOD3P08294 240 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF823P16415 610 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 RAP1AP62834 184 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 EIF5AL1Q6IS14 154 aaKnown RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 DPY19L4Q7Z388 723 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 NUP54Q7Z3B4 507 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 MFSD8Q8NHS3 518 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 MRM2Q9UI43 246 aaKnown RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 A0A1B0GWA3 101 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 A0A1B0GWJ7 208 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 GRXCR1A8MXD5 290 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 NUDT19A8MXV4 375 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 METAP1P53582 386 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 SHISA5Q8N114 240 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 CSNK1A1LQ8N752 337 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 PHYHIPQ92561 330 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 SDF2Q99470 211 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 MFRPQ9BY79 579 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 KLK13Q9UKR3 277 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 KCNS2Q9ULS6 477 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 TCF20Q9UGU0 1960 aaKnown RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 LOC390937A0A1W2PQ73 354 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF735P0CB33 412 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 CCNOP22674 350 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 NUBP1P53384 320 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 SPOCK1Q08629 439 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF239Q16600 458 aaKnown RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 TRMT12Q53H54 448 aaKnown RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 ALG10BQ5I7T1 473 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM164Q5U3C3 297 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 TMPRSS11FQ6ZWK6 438 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 SLC35D2Q76EJ3 337 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 MAMDC2Q7Z304 686 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 ADAMTS17Q8TE56 1095 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 COMMD4Q9H0A8 199 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 PLA2G2EQ9NZK7 142 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 PLXNA3P51805 1871 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 CLEC3AO75596 197 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 PRNPP04156 253 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 TIMP2P16035 220 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 HIST1H1TP22492 207 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 MAP3K8P41279 467 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 PPICP45877 212 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 SLC6A9P48067 706 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 APCDD1LQ8NCL9 501 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 VN1R2Q8NFZ6 395 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 NUDT16L1Q9BRJ7 211 aaKnown RBP6.73□□□□□ -1.33
CPSF6-202ENST00000435070 KCNE5Q9UJ90 142 aa6.73□□□□□ -1.33
CPSF6-202ENST00000435070 VCANP13611 3396 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms