RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 CMKLR1Q99788 373 aa12.21□□□□□ -0.46
COL6A3-207ENST00000433762 SHARPINQ9H0F6 387 aa12.21□□□□□ -0.46
COL6A3-207ENST00000433762 FAM206AQ9NX38 181 aa12.21□□□□□ -0.46
COL6A3-207ENST00000433762 CEP192Q8TEP8 1941 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 OR14I1A6ND48 311 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 SIX6O95475 246 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 H2BFMP0C1H6 154 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 GLB1P16278 677 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 HSF1Q00613 529 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 SFRP5Q5T4F7 317 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 OR2W3Q7Z3T1 314 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 BEST3Q8N1M1 668 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 BVESQ8NE79 360 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 LHFPL5Q8TAF8 219 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 WDR89Q96FK6 387 aaPredicted RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 OR11A1Q9GZK7 315 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 ZNF768Q9H5H4 540 aaKnown RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 RAB27BO00194 218 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 UBE2MP61081 183 aaKnown RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 QRFPP83859 136 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 SORDQ00796 357 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 DHRS2Q13268 280 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 RNASE10Q5GAN6 216 aaKnown RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 LYG2Q86SG7 212 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 JAGN1Q8N5M9 183 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 OR13C8Q8NGS7 320 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 OR8S1Q8NH09 359 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 RLN3Q8WXF3 142 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 DVL3Q92997 716 aaPredicted RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 TINAGL1Q9GZM7 467 aaPredicted RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 CHST6Q9GZX3 395 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 KCNK15Q9H427 330 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 CGGBP1Q9UFW8 167 aaPredicted RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 SLC5A6Q9Y289 635 aa12.2□□□□□ -0.46
COL6A3-207ENST00000433762 RPH3AQ9Y2J0 694 aaPredicted RBP12.2□□□□□ -0.46
COL6A3-207ENST00000433762 VSTM2BA6NLU5 285 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 HPP00738 406 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 CYC1P08574 325 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 FOLR1P15328 257 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 ZBTB25P24278 435 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 CD34P28906 385 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 THEM4Q5T1C6 240 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 RHBDD2Q6NTF9 364 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 NFAM1Q8NET5 270 aaPredicted RBP12.19□□□□□ -0.46
COL6A3-207ENST00000433762 OR51A2Q8NGJ7 313 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 OR1S1Q8NH92 325 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 PPP1R14AQ96A00 147 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 MRGPRX4Q96LA9 322 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 ANAPC10Q9UM13 185 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 TNFSF18Q9UNG2 199 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 CACNA1CQ13936 2221 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 DCDC2BA2VCK2 349 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 LIPT2A6NK58 231 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 D6RAR5 112 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 WISP1O95388 367 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 CHRM2P08172 466 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 OR1D5P58170 312 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 CFHR1Q03591 330 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 TLE3Q04726 772 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 SPOCK1Q08629 439 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 ZNF239Q16600 458 aaKnown RBP12.19□□□□□ -0.46
COL6A3-207ENST00000433762 LRFN4Q6PJG9 635 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 ZNF546Q86UE3 836 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 OR1M1Q8NGA1 313 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 OR10H5Q8NGA6 315 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 COQ8AQ8NI60 647 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 MITD1Q8WV92 249 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 PCNPQ8WW12 178 aaKnown RBP12.19□□□□□ -0.46
COL6A3-207ENST00000433762 CXorf58Q96LI9 332 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 COMMD9Q9P000 198 aa12.19□□□□□ -0.46
COL6A3-207ENST00000433762 MEIS3P1A6NDR6 274 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 OR5H14A6NHG9 310 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 GMFGO60234 142 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 SDC3O75056 442 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 ONECUT2O95948 504 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 HLA-DOBP13765 273 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 FKBP2P26885 142 aaKnown RBP12.18□□□□□ -0.46
COL6A3-207ENST00000433762 TAS2R31P59538 309 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 NR0B2Q15466 257 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 ACTBL2Q562R1 376 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 C11orf87Q6NUJ2 197 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 COX15Q7KZN9 410 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 MDGA2Q7Z553 956 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.18□□□□□ -0.46
COL6A3-207ENST00000433762 STPG2Q8N412 459 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 OR4D6Q8NGJ1 314 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 OR5D14Q8NGL3 314 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 ZBTB8AQ96BR9 441 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 SLAMF6Q96DU3 332 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 SLC6A7Q99884 636 aa12.18□□□□□ -0.46
COL6A3-207ENST00000433762 MRPL13Q9BYD1 178 aaKnown RBP12.18□□□□□ -0.46
COL6A3-207ENST00000433762 TPSD1Q9BZJ3 242 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms