RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 RAB1BQ9H0U4 201 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 OR51V1Q9H2C8 321 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 C1orf198Q9H425 327 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 POFUT1Q9H488 388 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZNF442Q9H7R0 627 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 WDR76Q9H967 626 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 BARX1Q9HBU1 254 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 MRPL22Q9NWU5 206 aaKnown RBP4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 TVP23BQ9NYZ1 205 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 TAAR3PQ9P1P4 343 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 KIF17Q9P2E2 1029 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 KLHL21Q9UJP4 597 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 BAIAP2Q9UQB8 552 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 STARD10Q9Y365 291 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 FKBP7Q9Y680 259 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 LHFPL6Q9Y693 200 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 CRYBG3Q68DQ2 2970 aa4.95□□□□□ -1.62
HMGB3P24-201ENST00000433260 FBN2P35556 2912 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CHD3Q12873 2000 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 IGHV4-30-2A0A087WSY4 118 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ANKRD65E5RJM6 399 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PRR23D1E9PI22 279 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 H7C417 338 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SPRY3O43610 288 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SYNGR3O43761 229 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 TMCC2O75069 709 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SNAP29O95721 258 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 LY6G6DO95868 133 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ABHD16AO95870 558 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 HPXP02790 462 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SPARCP09486 303 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PRR23D2P0DMB1 279 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 GAAP10253 952 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PSKH1P11801 424 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 HOXB6P17509 224 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SPI1P17947 270 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 FMO3P31513 532 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 GRK5P34947 590 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 GGT2P36268 569 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 RBMXP38159 391 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 MPV17P39210 176 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 MAGEB1P43366 347 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 HCCSP53701 268 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 KLF3P57682 345 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SELENOVP59797 346 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ACTR3P61158 418 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 RPS7P62081 194 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PPP1CBP62140 327 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 RPS23P62266 143 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CDK5Q00535 292 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 GK3PQ14409 553 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 HLXQ14774 488 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PTGES3Q15185 160 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SNAPC1Q16533 368 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 RSPO1Q2MKA7 263 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZNF718Q3SXZ3 478 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 KLHL12Q53G59 568 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ELFN2Q5R3F8 820 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLC27A4Q6P1M0 643 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ARL9Q6T311 187 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CLEC2AQ6UVW9 174 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CD300LDQ6UXZ3 194 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CFAP77Q6ZQR2 320 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 RFPL4BQ6ZWI9 263 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 HIPK1Q86Z02 1210 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ZDHHC13Q8IUH4 622 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CPOQ8IVL8 374 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 MRPL41Q8IXM3 137 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 SLC26A10Q8NG04 563 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 FAM168AQ92567 244 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 GTF3AQ92664 365 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CMBLQ96DG6 245 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 NRBF2Q96F24 287 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 DUS3LQ96G46 650 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 MARS2Q96GW9 593 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PLEKHA8Q96JA3 519 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PKP2Q99959 881 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 RBM4Q9BWF3 364 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 REG4Q9BYZ8 158 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 BCL2L14Q9BZR8 327 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 RACGAP1Q9H0H5 632 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 MS4A5Q9H3V2 200 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 C7orf69Q9H7B7 122 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ELOVL3Q9HB03 270 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PAPOLBQ9NRJ5 636 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 KRT84Q9NSB2 600 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 CENPMQ9NSP4 180 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 TREM2Q9NZC2 230 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 PTTG3PQ9NZH4 202 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 NDRG4Q9ULP0 352 aaKnown RBP4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 ARFGEF3Q5TH69 2177 aa4.94□□□□□ -1.62
HMGB3P24-201ENST00000433260 MED13LQ71F56 2210 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 APCP25054 2843 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 ARRDC5A6NEK1 342 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 M0R129 80 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 M0R233 179 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 SURF4O15260 269 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 CDC14BO60729 498 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 BAG2O95816 211 aa4.93□□□□□ -1.62
HMGB3P24-201ENST00000433260 IGHV3-13P01766 116 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms