RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 MOB1AQ9H8S9 216 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 HRASLSQ9HDD0 168 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 SPTBN4Q9H254 2564 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 SPTBN2O15020 2390 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 TRAV6A0A075B6T7 132 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 PRAF2O60831 178 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 HPP00738 406 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 C1QBP02746 253 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 CCL3P10147 92 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 PSMB1P20618 241 aaKnown RBP11.4□□□□□ -0.58
DDX56-204ENST00000431640 STOMP27105 288 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 HTR2CP28335 458 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 FAUP35544 74 aaKnown RBP11.4□□□□□ -0.58
DDX56-204ENST00000431640 H3F3AP84243 136 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 SSBP1Q04837 148 aaKnown RBP11.4□□□□□ -0.58
DDX56-204ENST00000431640 RTP5Q14D33 572 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 CDK10Q15131 360 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 OLFML2AQ68BL7 652 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 ELMOD2Q8IZ81 293 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 OR51D1Q8NGF3 324 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 OR6M1Q8NGM8 313 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 NKD1Q969G9 470 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 INTS12Q96CB8 462 aaKnown RBP11.4□□□□□ -0.58
DDX56-204ENST00000431640 PIGQQ9BRB3 760 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 SCNM1Q9BWG6 230 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 B3GNT4Q9C0J1 378 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 GHITMQ9H3K2 345 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 AUNIPQ9H7T9 357 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 SEC61A2Q9H9S3 476 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 DKKL1Q9UK85 242 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 TCFL5Q9UL49 500 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 FARSAQ9Y285 508 aaKnown RBP11.4□□□□□ -0.58
DDX56-204ENST00000431640 KNTC1P50748 2209 aa11.4□□□□□ -0.58
DDX56-204ENST00000431640 A0A0A6YYH2 397 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 LOC107986453A0A1B0GWG9 222 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 GGT3PA6NGU5 568 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 A6NJ64 397 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.39□□□□□ -0.59
DDX56-204ENST00000431640 ZNF878C9JN71 531 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 MASP2O00187 686 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 SULT1C2O00338 296 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 DNPH1O43598 174 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 ZIC3O60481 467 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 CTAG2O75638 210 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 MT-ND4P03905 459 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 OPN1LWP04000 364 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 P04436 131 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 ITGA5P08648 1049 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 TCN2P20062 427 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 TCEA1P23193 301 aaKnown RBP11.39□□□□□ -0.59
DDX56-204ENST00000431640 POU3F4P49335 361 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 RPS15P62841 145 aaKnown RBP11.39□□□□□ -0.59
DDX56-204ENST00000431640 RAC1P63000 192 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 POU4F3Q15319 338 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 TAF13Q15543 124 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 H3F3CQ6NXT2 135 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 LUZP2Q86TE4 346 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 WDFY1Q8IWB7 410 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 PTX4Q96A99 478 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 RNF170Q96K19 258 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 PBOV1Q9GZY1 135 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 OR51J1Q9H342 316 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 PROK2Q9HC23 129 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 MCUBQ9NWR8 336 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 FAM206AQ9NX38 181 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 IL17BQ9UHF5 180 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 FBXL3Q9UKT7 428 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 RCE1Q9Y256 329 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 POLR1DQ9Y2S0 133 aa11.39□□□□□ -0.59
DDX56-204ENST00000431640 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 H0YC42 278 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 H3BSH0 61 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 H7C417 338 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 QDPRP09417 244 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 CSF1P09603 554 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 WT1P19544 449 aaPredicted RBP11.38□□□□□ -0.59
DDX56-204ENST00000431640 HSD11B1P28845 292 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 GZMKP49863 264 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 CCR6P51684 374 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 LSM6P62312 80 aaKnown RBP11.38□□□□□ -0.59
DDX56-204ENST00000431640 FOXK1P85037 733 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 C19orf57Q0VDD7 668 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 FAPQ12884 760 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 GSG1Q2KHT4 349 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 TMEM164Q5U3C3 297 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 RAET1LQ5VY80 246 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 CORO6Q6QEF8 472 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 PPP1R32Q7Z5V6 425 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 FGD2Q7Z6J4 655 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 ESX1Q8N693 406 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 OR5D14Q8NGL3 314 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 KCNE4Q8WWG9 221 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 SLC25A28Q96A46 364 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 HYLS1Q96M11 299 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 GNRHR2Q96P88 292 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 SORCS2Q96PQ0 1159 aa11.38□□□□□ -0.59
DDX56-204ENST00000431640 FAM117AQ9C073 453 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms