RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ZNF43P17038 809 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 DNASE1L1P49184 302 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 Q0VFX4 171 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 CSRP2Q16527 193 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 GLYATL3Q5SZD4 288 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF468Q5VIY5 522 aaPredicted RBP12.37□□□□□ -0.43
HOXC4-202ENST00000430889 H3F3CQ6NXT2 135 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF813Q6ZN06 617 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 GPAT4Q86UL3 456 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.37□□□□□ -0.43
HOXC4-202ENST00000430889 C9orf62Q8N4C0 152 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 HYLS1Q96M11 299 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 GNRHR2Q96P88 292 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 SPRY4Q9C004 299 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 MOB1AQ9H8S9 216 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 NPDC1Q9NQX5 325 aaPredicted RBP12.37□□□□□ -0.43
HOXC4-202ENST00000430889 PTTG3PQ9NZH4 202 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 CGGBP1Q9UFW8 167 aaPredicted RBP12.37□□□□□ -0.43
HOXC4-202ENST00000430889 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
HOXC4-202ENST00000430889 DMDP11532 3685 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 A0A0A6YYH2 397 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 OR2M5A3KFT3 312 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 A6NJ64 397 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF878C9JN71 531 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 MASP2O00187 686 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 SULT1C2O00338 296 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 RBBP9O75884 186 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 STK17BO94768 372 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 IL5P05113 134 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 HSD11B1P28845 292 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 CDAP32320 146 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 VEGFCP49767 419 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 B3GALT5-AS1P59052 145 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 GUCA2AQ02747 115 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 C10orf128Q5T292 105 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 TCEAL6Q6IPX3 200 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 FAAP20Q6NZ36 180 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 ADGRE4PQ86SQ3 457 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 BEST4Q8NFU0 473 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 OR4C16Q8NGL9 310 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 TCEAL3Q969E4 200 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 TMEM54Q969K7 222 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 ADAT3Q96EY9 351 aaPredicted RBP12.36□□□□□ -0.43
HOXC4-202ENST00000430889 MED30Q96HR3 178 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 PCDHGA5Q9Y5G8 931 aa12.36□□□□□ -0.43
HOXC4-202ENST00000430889 TRAV18A0A075B6X5 111 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 A0A1B0GVI7 797 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 G3V3Q6 166 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 ARPC1BO15143 372 aaKnown RBP12.35□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CD63P08962 238 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 QDPRP09417 244 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CSF1P09603 554 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 RAB6AP20340 208 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CCL1P22362 96 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 ANOS1P23352 680 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 EIF1AXP47813 144 aaKnown RBP12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CLDN6P56747 220 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 QRFPP83859 136 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 SPOCK1Q08629 439 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 METTL11BQ5VVY1 283 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 GLDNQ6ZMI3 551 aaPredicted RBP12.35□□□□□ -0.43
HOXC4-202ENST00000430889 Q6ZTK2 550 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CREB3L2Q70SY1 520 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 TIPARPQ7Z3E1 657 aaKnown RBP12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CLEC1AQ8NC01 280 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 OR4D6Q8NGJ1 314 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 OR1J2Q8NGS2 313 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 FOXRED1Q96CU9 486 aaPredicted RBP12.35□□□□□ -0.43
HOXC4-202ENST00000430889 OR10A4Q9H209 315 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 NOX3Q9HBY0 568 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 HPF1Q9NWY4 346 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 TAS2R8Q9NYW2 309 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 TCFL5Q9UL49 500 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 LOXL2Q9Y4K0 774 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 SDK2Q58EX2 2172 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 PMS2P1A4D2B8 440 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 AKR7A2O43488 359 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CTSSP25774 331 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 MPLP40238 635 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 SUCLG1P53597 346 aaKnown RBP12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CLDN17P56750 224 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 LPAL2Q16609 132 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 PCGF3Q3KNV8 242 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 ZNF528Q3MIS6 628 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 PHYHD1Q5SRE7 291 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 DCAF12Q5T6F0 453 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CARD17Q5XLA6 110 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 TMEM123Q8N131 208 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 OR11H4Q8NGC9 324 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 LILRB4Q8NHJ6 448 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 CT55Q8WUE5 264 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 FGGYQ96C11 551 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 SGCZQ96LD1 299 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 DLL4Q9NR61 685 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 GLTPQ9NZD2 209 aa12.35□□□□□ -0.43
HOXC4-202ENST00000430889 FBLN5Q9UBX5 448 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms