RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 WNT4P56705 351 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR12D2P58182 307 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 PSMA6P60900 246 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 HIST1H3AP68431 136 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SORDQ00796 357 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SNTB1Q13884 538 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 IRF3Q14653 427 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 TBC1D28Q2M2D7 210 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 CDONQ4KMG0 1287 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 HIST2H3PS2Q5TEC6 136 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 KCTD8Q6ZWB6 473 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 HIST2H3AQ71DI3 136 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 KLBQ86Z14 1044 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF679Q8IYX0 411 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SYS1Q8N2H4 156 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF283Q8N7M2 679 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC30A7Q8NEW0 376 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SPRYD4Q8WW59 207 aaPredicted RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 GATAD2BQ8WXI9 593 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 HSD17B8Q92506 261 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC7A6Q92536 515 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 FCGR1BQ92637 280 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 RORBQ92753 470 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 MS4A3Q96HJ5 214 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 COQ7Q99807 217 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 MRPS26Q9BYN8 205 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 ISG20L2Q9H9L3 353 aaKnown RBP6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 CDH20Q9HBT6 801 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 BRD7Q9NPI1 651 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 ACOT13Q9NPJ3 140 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 TRIM36Q9NQ86 728 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 B3GNT2Q9NY97 397 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 ATPIF1Q9UII2 106 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SCOCQ9UIL1 159 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 N6AMT1Q9Y5N5 214 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC25A15Q9Y619 301 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 DOCK7Q96N67 2140 aa6.89□□□□□ -1.31
HMGA1P4-201ENST00000428643 PNMA8CA0A1B0GUJ8 204 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 TUBAL3A6NHL2 446 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 LOC110117498-PIK3R3F6TDL0 507 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 M0R135 149 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 SYNGR3O43761 229 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 ABHD16AO95870 558 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 CLPTM1O96005 669 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 SERPINA5P05154 406 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 ANXA2P07355 339 aaKnown RBP6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 DBHP09172 617 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 CECR9P0C854 216 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC2A1P11166 492 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 CCL2P13500 99 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 CBR1P16152 277 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 EMX1Q04741 257 aaPredicted RBP6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 MFGE8Q08431 387 aaPredicted RBP6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 SPHARQ15513 63 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF684Q5T5D7 378 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 BCL2L15Q5TBC7 163 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 LIPNQ5VXI9 398 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 RNLSQ5VYX0 342 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF544Q6NX49 715 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 DEGS2Q6QHC5 323 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 SSX8Q7RTT4 187 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 KCTD20Q7Z5Y7 419 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 MYPOPQ86VE0 399 aaPredicted RBP6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 NANOGP1Q8N7R0 232 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZFP41Q8N8Y5 198 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 PELI1Q96FA3 418 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF799Q96GE5 643 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 BOD1Q96IK1 185 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 WFIKKN1Q96NZ8 548 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR5M11Q96RB7 305 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 DOK1Q99704 481 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 KCNJ15Q99712 375 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 KCNS3Q9BQ31 491 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF649Q9BS31 505 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR10A4Q9H209 315 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 NIPAL2Q9H841 368 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 NPDC1Q9NQX5 325 aaPredicted RBP6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 NPAP1Q9NZP6 1156 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 NDRG3Q9UGV2 375 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 GRIP1Q9Y3R0 1128 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 R4GMQ9 66 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 MYO18BQ8IUG5 2567 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 MED12LQ86YW9 2145 aa6.88□□□□□ -1.31
HMGA1P4-201ENST00000428643 LOC100509620A0A075B734 347 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 TMEM269A0A1B0GVZ9 245 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 E9PI62 339 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 TBX1O43435 398 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 IGKV3-15P01624 115 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 APOC1P02654 83 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 THBDP07204 575 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 ACSM4P0C7M7 580 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 RNF224P0DH78 156 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 COX5BP10606 129 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF14P17017 642 aaPredicted RBP6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 CRYGSP22914 178 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 PAX7P23759 505 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 GTF2A1P52655 376 aaPredicted RBP6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 TPTEP56180 551 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms