RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 LYPD2Q6UXB3 125 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 MOGAT3Q86VF5 341 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 KLBQ86Z14 1044 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 OFCC1Q8IZS5 231 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 TMIGD2Q96BF3 282 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 MEGF10Q96KG7 1140 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 TMEM246Q9BRR3 403 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 NDEL1Q9GZM8 345 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 ASH2LQ9UBL3 628 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 IL20RAQ9UHF4 553 aa13.84□□□□□ -0.19
VARS-216ENST00000428445 TEX13CA0A0J9YWL9 993 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 F5H5P2 479 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 J3QW42 95 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 SURF4O15260 269 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 MLNRO43193 412 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 HOXA3O43365 443 aaPredicted RBP13.83□□□□□ -0.2
VARS-216ENST00000428445 SLC16A7O60669 478 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 HLA-DPB1P04440 258 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 IFNW1P05000 195 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 GNB2P62879 340 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 IL13RA1P78552 427 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 MEP1BQ16820 701 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 DEFB112Q30KQ8 113 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 SLC27A4Q6P1M0 643 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 ZNF730Q6ZMV8 503 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 TMPRSS11FQ6ZWK6 438 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 SPATC1Q76KD6 591 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 RRM2BQ7LG56 351 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 FAM122BQ7Z309 247 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 ARPINQ7Z6K5 226 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 BHLHE23Q8NDY6 225 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 OR1F12Q8NHA8 337 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 ACOT11Q8WXI4 607 aaPredicted RBP13.83□□□□□ -0.2
VARS-216ENST00000428445 ANKRD19PQ9H560 264 aa13.83□□□□□ -0.2
VARS-216ENST00000428445 IGHV2-70DA0A0C4DH43 119 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 PRSS37A4D1T9 235 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 OR6C6A6NF89 314 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 IFNL4K9M1U5 179 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 PLATP00750 562 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 CD14P08571 375 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 ZBED5Q49AG3 693 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 MIDNQ504T8 468 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 C16orf87Q6PH81 154 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 CORO6Q6QEF8 472 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 KIR3DL3Q8N743 410 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 OR8G5Q8NG78 346 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 OR10S1Q8NGN2 331 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 RP9Q8TA86 221 aaKnown RBP13.82□□□□□ -0.2
VARS-216ENST00000428445 RAB40AQ8WXH6 277 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 DACT3Q96B18 629 aaPredicted RBP13.82□□□□□ -0.2
VARS-216ENST00000428445 UPRTQ96BW1 309 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 FAM46AQ96IP4 442 aaKnown RBP13.82□□□□□ -0.2
VARS-216ENST00000428445 ZNF570Q96NI8 536 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 TSSK2Q96PF2 358 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 SYT4Q9H2B2 425 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 ZMAT3Q9HA38 289 aaKnown RBP13.82□□□□□ -0.2
VARS-216ENST00000428445 CMTM6Q9NX76 183 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 LRCH1Q9Y2L9 728 aa13.82□□□□□ -0.2
VARS-216ENST00000428445 PRKDCP78527 4128 aaKnown RBP13.81□□□□□ -0.2
VARS-216ENST00000428445 VWFP04275 2813 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 POM121CA8CG34 1229 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 CLDN34H7C241 214 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 SOCS2O14508 198 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 NDUFAB1O14561 156 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 XKRYO14609 159 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 ZNF682O95780 498 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 RAC2P15153 192 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 MTNR1AP48039 350 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 CENPAP49450 140 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 LSM6P62312 80 aaKnown RBP13.81□□□□□ -0.2
VARS-216ENST00000428445 AQP6Q13520 282 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 RSPO1Q2MKA7 263 aaPredicted RBP13.81□□□□□ -0.2
VARS-216ENST00000428445 RUSC1-AS1Q66K80 236 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 BTNL3Q6UXE8 466 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 LRRN1Q6UXK5 716 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 PTCHD4Q6ZW05 846 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 MBOAT2Q6ZWT7 520 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 TSEN54Q7Z6J9 526 aaKnown RBP13.81□□□□□ -0.2
VARS-216ENST00000428445 MUC20Q8N307 709 aaPredicted RBP13.81□□□□□ -0.2
VARS-216ENST00000428445 HOPXQ9BPY8 73 aaPredicted RBP13.81□□□□□ -0.2
VARS-216ENST00000428445 CDADC1Q9BWV3 514 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 NUAK2Q9H093 628 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 PDP1Q9P0J1 537 aaPredicted RBP13.81□□□□□ -0.2
VARS-216ENST00000428445 ATPIF1Q9UII2 106 aa13.81□□□□□ -0.2
VARS-216ENST00000428445 FAM181BA6NEQ2 426 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 PTP4A3O75365 173 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 KHDRBS3O75525 346 aaKnown RBP13.8□□□□□ -0.2
VARS-216ENST00000428445 RGS6P49758 472 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 FGF12P61328 243 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 KRR1Q13601 381 aaKnown RBP13.8□□□□□ -0.2
VARS-216ENST00000428445 GPR139Q6DWJ6 353 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 CGB2Q6NT52 195 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 FBXW12Q6X9E4 464 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 C9orf139Q6ZV77 190 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 CBLL1Q75N03 491 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 NAA40Q86UY6 237 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 GLB1L2Q8IW92 636 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 OR13G1Q8NGZ3 307 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 NEIL1Q96FI4 390 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms