RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ZNF665Q9H7R5 613 aa15.65■□□□□ 0.1
GPC1-205ENST00000427506 PTTG3PQ9NZH4 202 aa15.65■□□□□ 0.1
GPC1-205ENST00000427506 ATPIF1Q9UII2 106 aa15.65■□□□□ 0.1
GPC1-205ENST00000427506 PRPF19Q9UMS4 504 aaKnown RBP15.65■□□□□ 0.1
GPC1-205ENST00000427506 WIPI2Q9Y4P8 454 aa15.65■□□□□ 0.1
GPC1-205ENST00000427506 LHFPL6Q9Y693 200 aa15.65■□□□□ 0.1
GPC1-205ENST00000427506 CDH10Q9Y6N8 788 aa15.65■□□□□ 0.1
GPC1-205ENST00000427506 ANK3Q12955 4377 aaKnown RBP15.64■□□□□ 0.09
GPC1-205ENST00000427506 OR6C68A6NDL8 312 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 GASTP01350 101 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 ANPEPP15144 967 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 MAGEA2P43356 314 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 MS4A2Q01362 244 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 SLC3A1Q07837 685 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 PEG10Q86TG7 708 aaKnown RBP15.64■□□□□ 0.09
GPC1-205ENST00000427506 ZBTB46Q86UZ6 589 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 LINC00346Q8IVM7 164 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 SLC26A10Q8NG04 563 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 OR2Z1Q8NG97 314 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 OR51F2Q8NH61 342 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 SPATA3Q8NHX4 192 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 TMEM186Q96B77 213 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 HAVCR1Q96D42 359 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 RAB39BQ96DA2 213 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 COQ7Q99807 217 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 REEP1Q9H902 201 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 TBC1D23Q9NUY8 699 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 HIF1ANQ9NWT6 349 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 U3KQV3 271 aa15.64■□□□□ 0.09
GPC1-205ENST00000427506 ISPDA4D126 451 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 J3QW42 95 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 UBOX5O94941 541 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 CD55P08174 381 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 T-ENOLP0DO92 83 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 KITLGP21583 273 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 THBS2P35442 1172 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 HIST1H3AP68431 136 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 COX10Q12887 443 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 CDK5R2Q13319 367 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 HIST2H3PS2Q5TEC6 136 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 OR2T5Q6IEZ7 315 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 ACSM5Q6NUN0 579 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 HIST2H3AQ71DI3 136 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 OR5AS1Q8N127 324 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 AQP11Q8NBQ7 271 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 OR4C15Q8NGM1 316 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 OR2T29Q8NH02 315 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 POP5Q969H6 163 aaKnown RBP15.63■□□□□ 0.09
GPC1-205ENST00000427506 APOBEC3DQ96AK3 386 aaPredicted RBP15.63■□□□□ 0.09
GPC1-205ENST00000427506 CCDC124Q96CT7 223 aaKnown RBP15.63■□□□□ 0.09
GPC1-205ENST00000427506 PITX2Q99697 317 aa15.63■□□□□ 0.09
GPC1-205ENST00000427506 SAMHD1Q9Y3Z3 626 aaKnown RBP15.63■□□□□ 0.09
GPC1-205ENST00000427506 RAC2P15153 192 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 ZNF823P16415 610 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 TNFRSF1AP19438 455 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 HLXQ14774 488 aaPredicted RBP15.62■□□□□ 0.09
GPC1-205ENST00000427506 SPRNQ5BIV9 151 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 SLC18B1Q6NT16 456 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 RASSF6Q6ZTQ3 369 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 ZNF771Q7L3S4 317 aaPredicted RBP15.62■□□□□ 0.09
GPC1-205ENST00000427506 CYB561A3Q8NBI2 242 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 PROKR2Q8NFJ6 384 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 ASB9Q96DX5 294 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 GAL3ST1Q99999 423 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 PLA2G12AQ9BZM1 189 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 IL20Q9NYY1 176 aa15.62■□□□□ 0.09
GPC1-205ENST00000427506 F5H5K5 113 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 BHLHE40O14503 412 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 SURF4O15260 269 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 PYCR1P32322 319 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 ERFP50548 548 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 MICAQ29983 383 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 ZNF770Q6IQ21 691 aaPredicted RBP15.61■□□□□ 0.09
GPC1-205ENST00000427506 FAHD2BQ6P2I3 314 aaPredicted RBP15.61■□□□□ 0.09
GPC1-205ENST00000427506 CFAP77Q6ZQR2 320 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 Q6ZR03 302 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 ATG16L2Q8NAA4 619 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 OR2T4Q8NH00 348 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 FAHD2AQ96GK7 314 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 CLPTM1LQ96KA5 538 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 ATF6BQ99941 703 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 THTPAQ9BU02 230 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 TSSK6Q9BXA6 273 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 C1orf21Q9H246 121 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 VNN3Q9NY84 501 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 TAS2R1Q9NYW7 299 aa15.61■□□□□ 0.09
GPC1-205ENST00000427506 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.6■□□□□ 0.09
GPC1-205ENST00000427506 TRAV20A0A0B4J274 112 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 IGHV2-5P01817 119 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 RAP2AP10114 183 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 ECH1Q13011 328 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 OR2T2Q6IF00 324 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 SHQ1Q6PI26 577 aaKnown RBP15.6■□□□□ 0.09
GPC1-205ENST00000427506 FBXW12Q6X9E4 464 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 PHC2Q8IXK0 858 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 OR8D4Q8NGM9 314 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 ZNF582Q96NG8 517 aaPredicted RBP15.6■□□□□ 0.09
GPC1-205ENST00000427506 UBAP1Q9NZ09 502 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 IL19Q9UHD0 177 aa15.6■□□□□ 0.09
GPC1-205ENST00000427506 CYB5R1Q9UHQ9 305 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms