RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 COL9A2Q14055 689 aaPredicted RBP13.21□□□□□ -0.3
PTPN13-203ENST00000427191 C1orf220Q5T0J3 134 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 Q8IYB0 196 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 C20orf24Q9BUV8 137 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 CDCP1Q9H5V8 836 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 PRSS56P0CW18 603 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 SDHAP31040 664 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 RAD52P43351 418 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 CLDN20P56880 219 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 OR51F2Q8NH61 342 aa13.21□□□□□ -0.3
PTPN13-203ENST00000427191 RRP8O43159 456 aaKnown RBP13.2□□□□□ -0.3
PTPN13-203ENST00000427191 ARNTP27540 789 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 SYT14P1Q58G82 188 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 GALNT16Q8N428 558 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 KIR3DX1Q9H7L2 352 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 CALHM2Q9HA72 323 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 TCAPO15273 167 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 SOX15O60248 233 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 PTBP3O95758 552 aaKnown RBP13.2□□□□□ -0.3
PTPN13-203ENST00000427191 ALOX5APP20292 161 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 LYG2Q86SG7 212 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 C2orf50Q96LR7 162 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 FKBP11Q9NYL4 201 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 PTGESO14684 152 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 CD80P33681 288 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF789Q5FWF6 425 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 UBE3DQ7Z6J8 389 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 MEX3DQ86XN8 651 aaKnown RBP13.2□□□□□ -0.3
PTPN13-203ENST00000427191 FAM71CQ8NEG0 241 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 LKAAEAR1Q8TD35 194 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 SLC17A5Q9NRA2 495 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 HS3ST3A1Q9Y663 406 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 KNTC1P50748 2209 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 HSBP1O75506 76 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 VEGFBP49765 207 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 FXNQ16595 210 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 DRAM2Q6UX65 266 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 VRK3Q8IV63 474 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 BAP18Q8IXM2 172 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF2Q9BSG1 426 aaPredicted RBP13.2□□□□□ -0.3
PTPN13-203ENST00000427191 SEMA3BQ13214 749 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 COX19Q49B96 90 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 OR5M10Q6IEU7 315 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 BTNL3Q6UXE8 466 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 CMTM4Q8IZR5 234 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 BCL2L2Q92843 193 aaPredicted RBP13.2□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF391Q9UJN7 358 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 A0A0A6YYJ9 748 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 A0A0B4J203 849 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 KIR2DS2P43631 304 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 SLC2A9Q9NRM0 540 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 LOC107986453A0A1B0GWG9 222 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
PTPN13-203ENST00000427191 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 TXNDC12O95881 172 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 EXD3Q8N9H8 876 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 NXPE3Q969Y0 559 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 TPSD1Q9BZJ3 242 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 USP3Q9Y6I4 520 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 LOC102723971A0A1B0GUV8 181 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 CDC14CA4D256 554 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 OXA1LQ15070 435 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 DHRS11Q6UWP2 260 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 GABRG1Q8N1C3 465 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 POM121L2Q96KW2 1035 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 TWSG1Q9GZX9 223 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 GLIPR2Q9H4G4 154 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 CTSCP53634 463 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 ERVFC1-1P60608 527 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 AQP6Q13520 282 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 SLC5A6Q9Y289 635 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 OR5G3P0C626 314 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 TBXA2RP21731 343 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 SELENBP1Q13228 472 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 TRAT1Q6PIZ9 186 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 LRP10Q7Z4F1 713 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 RPL3LQ92901 407 aaKnown RBP13.19□□□□□ -0.3
PTPN13-203ENST00000427191 NTNG2Q96CW9 530 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 FOXN4Q96NZ1 517 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 SUCNR1Q9BXA5 334 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 SLC17A4Q9Y2C5 497 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 DSCR3O14972 297 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 SMAD6O43541 496 aaKnown RBP13.19□□□□□ -0.3
PTPN13-203ENST00000427191 ANKRD34CP0C6C1 535 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 SLC25A6P12236 298 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 EDDM3AQ14507 147 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 SCD5Q86SK9 330 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
PTPN13-203ENST00000427191 C7orf72A4D263 438 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 TOX3O15405 576 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 ZNF354AO60765 605 aaPredicted RBP13.18□□□□□ -0.3
PTPN13-203ENST00000427191 HPP00738 406 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 SPCS3P61009 180 aa13.18□□□□□ -0.3
PTPN13-203ENST00000427191 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms