RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 GRIP1Q9Y3R0 1128 aa21.09■□□□□ 0.97
VEGFA-209ENST00000425836 ABHD16AO95870 558 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 NGFP01138 241 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 SERPINF1P36955 418 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 CAPGP40121 348 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 ERVS71-1P61550 626 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 TMED1Q13445 227 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 ZNF691Q5VV52 312 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 SPATC1Q76KD6 591 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 CDH24Q86UP0 819 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 THEM6Q8WUY1 208 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 RNF133Q8WVZ7 376 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 DCLRE1CQ96SD1 692 aaKnown RBP21.08■□□□□ 0.97
VEGFA-209ENST00000425836 BCL2L14Q9BZR8 327 aa21.08■□□□□ 0.97
VEGFA-209ENST00000425836 LYNP07948 512 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 ALOX5APP20292 161 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 RPS23P62266 143 aaKnown RBP21.07■□□□□ 0.96
VEGFA-209ENST00000425836 MST1LQ2TV78 715 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 AGAP6Q5VW22 663 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 ARL9Q6T311 187 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 RFPL4BQ6ZWI9 263 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 ABHD4Q8TB40 342 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 CCL19Q99731 98 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 TRAF4Q9BUZ4 470 aaPredicted RBP21.07■□□□□ 0.96
VEGFA-209ENST00000425836 ELOVL3Q9HB03 270 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 CMAHPQ9Y471 501 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 ITPR2Q14571 2701 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 TACC2O95359 2948 aa21.07■□□□□ 0.96
VEGFA-209ENST00000425836 VSTM5A8MXK1 200 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 ZNF878C9JN71 531 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 F5H5K5 113 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 H0YAE9 185 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 H0YJX3 145 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 LCKP06239 509 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 SBK2P0C263 348 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 DNASE1P24855 282 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 AQP4P55087 323 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 OR51G2Q8NGK0 314 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 OR1J1Q8NGS3 322 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 COPS4Q9BT78 406 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 TBCCD1Q9NVR7 557 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 CLN6Q9NWW5 311 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 LAMP5Q9UJQ1 280 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.06■□□□□ 0.963e-7■■□□□ 12.6
VEGFA-209ENST00000425836 RAI1Q7Z5J4 1906 aaPredicted RBP21.06■□□□□ 0.96
VEGFA-209ENST00000425836 ACSM4P0C7M7 580 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 OTX1P32242 354 aaPredicted RBP21.06■□□□□ 0.96
VEGFA-209ENST00000425836 NUDT6P53370 316 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 IL5RAQ01344 420 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 TAF13Q15543 124 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 RGS7BPQ6MZT1 257 aaPredicted RBP21.06■□□□□ 0.96
VEGFA-209ENST00000425836 UNQ6126/PRO20091Q6UXV3 157 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 APH1BQ8WW43 257 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 IPCEF1Q8WWN9 437 aaPredicted RBP21.06■□□□□ 0.96
VEGFA-209ENST00000425836 TFAP2CQ92754 450 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 NINJ1Q92982 152 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 MRPL24Q96A35 216 aaKnown RBP21.06■□□□□ 0.96
VEGFA-209ENST00000425836 VCX3BQ9H321 246 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 HEATR1Q9H583 2144 aaKnown RBP21.06■□□□□ 0.96
VEGFA-209ENST00000425836 CBLN4Q9NTU7 201 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 FZR1Q9UM11 496 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 COPS3Q9UNS2 423 aa21.06■□□□□ 0.96
VEGFA-209ENST00000425836 CSMD2Q7Z408 3487 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 APOL3O95236 402 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 OPRL1P41146 370 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 PPP1CBP62140 327 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 POU4F2Q12837 409 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 MAD2L1BPQ15013 274 aaPredicted RBP21.05■□□□□ 0.96
VEGFA-209ENST00000425836 EFNB3Q15768 340 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 SWI5Q1ZZU3 235 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 C11orf71Q6IPW1 123 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 RHOUQ7L0Q8 258 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 NAA40Q86UY6 237 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 SLC35F2Q8IXU6 374 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 PIGTQ969N2 578 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 SPTSSAQ969W0 71 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 Q96MT0 163 aa21.05■□□□□ 0.96
VEGFA-209ENST00000425836 TMEM129A0AVI4 362 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 M0R135 149 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 GNAO1P09471 354 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 MTNR1AP48039 350 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 RGS6P49758 472 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 TPTEP56180 551 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 IL18R1Q13478 541 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 SPATA46Q5T0L3 261 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 COLCA1Q6ZS62 124 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 LRP11Q86VZ4 500 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 C1orf174Q8IYL3 243 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 ZNF799Q96GE5 643 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 MARS2Q96GW9 593 aaKnown RBP21.04■□□□□ 0.96
VEGFA-209ENST00000425836 KCNJ15Q99712 375 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 MRPL37Q9BZE1 423 aaKnown RBP21.04■□□□□ 0.96
VEGFA-209ENST00000425836 STARD10Q9Y365 291 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 TMEM14AQ9Y6G1 99 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 LRBAP50851 2863 aa21.04■□□□□ 0.96
VEGFA-209ENST00000425836 SPG11Q96JI7 2443 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 SNTNA6NMZ2 147 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 B9A039 149 aa21.03■□□□□ 0.96
VEGFA-209ENST00000425836 WBP4O75554 376 aaKnown RBP21.03■□□□□ 0.96
VEGFA-209ENST00000425836 ATP6V1E1P36543 226 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms